Query= MSMg01no116_j16.b1 MSMg01no116_j16.b1 CHROMAT_FILE:
MSMg01no116_j16.b1 PHD_FILE: MSMg01no116_j16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:54 2005
(506 letters)
>mm_chr14_61432585_61433491
Length = 907
Score = 891 bits (461), Expect = 0.0
Identities = 500/521 (95%), Gaps = 15/521 (2%)
Strand = Plus / Plus
Query: 1 catgtactaaggctgccgtctgctcatgtttgtggtaggaaccctactctgccatccaca 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 187 catgtactaaggctgccgtctgctcatgtttgtggtaggagccctactctgccatccaca 246
Query: 61 ggtggtgaataatcgacagctagaggagctggaaactgggtactgagctggcagatggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ggtggtgaataatcgacagctagaggagctggaaactgggtactgagctggcagatggag 306
Query: 121 gttctgggaaaccacccctgcctttcaggtgctcacgctgagaaagaccatgagtctgct 180
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 307 gttctgggaaaccatccctgcctttcaggtgctcatgctgagaaagaccatgagtctgct 366
Query: 181 ctcttacatggctacatgtgctgtgcccaaagtgccatggtgccgtgtgggtaggcggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ctcttacatggctacatgtgctgtgcccaaagtgccatggtgccgtgtgggtaggcggac 426
Query: 241 ctgcttcctcggggtgctaacctgaaactcaggaaggtgagggacacaggacagctggcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ctgcttcctcggggtgctaacctgaaactcaggaaggtgagggacacaggacagctggcg 486
Query: 301 tgctgagccctaacccagagccaggtgttgtgcctgtgtgggctgtgctgttgacttatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tgctgagccctaacccagagccaggtgttgtgcctgtgtgggctgtgctgttgacttatc 546
Query: 361 agcaggtactcagtg----gccatc----------taagtaatttgacctct-attggga 405
||||||||||||||| |||||| ||||||||||||||||| |||||||
Sbjct: 547 agcaggtactcagtgagtggccatcatgtacagtctaagtaatttgacctctgattggga 606
Query: 406 aaaccatccatgcaagtgctcaggcttgctttcagcttcctcccctggctgtcagacagt 465
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 607 aaaccatccatgcaggtgctcaggcttgctttcagcttccttccctggctgtcagacagt 666
Query: 466 aattattatcatttttattattattagacatgatttggcct 506
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 667 aattattattatttttattattattagacatgatttggcct 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 907
Length adjustment: 10
Effective length of query: 496
Effective length of database: 897
Effective search space: 444912
Effective search space used: 444912
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_j16.g1 MSMg01no116_j16.g1 CHROMAT_FILE:
MSMg01no116_j16.g1 PHD_FILE: MSMg01no116_j16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:54 2005
(155 letters)
>mm_chr14_61585474_61586028
Length = 555
Score = 277 bits (143), Expect = 3e-79
Identities = 152/155 (98%)
Strand = Plus / Minus
Query: 1 agtcggctgatgcccactcccttttggaagggaggccatactttctgcgatccggcactt 60
||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 355 agtcggctgatgcccactcccttttggaagggaggccatactttctgtgatctggcactt 296
Query: 61 tgttgagaataattgtctcaagaagactgtctattccagggagaccataaagaacagtcc 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 295 tgttgagaataattgtctcaagaagactgtctattccagggacaccataaagaacagtcc 236
Query: 121 tattcccttactctttgtagacaactgccaggagt 155
|||||||||||||||||||||||||||||||||||
Sbjct: 235 tattcccttactctttgtagacaactgccaggagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 155
Length of database: 555
Length adjustment: 8
Effective length of query: 147
Effective length of database: 547
Effective search space: 80409
Effective search space used: 80409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
