Query= MSMg01no117_d07.b1 MSMg01no117_d07.b1 CHROMAT_FILE:
MSMg01no117_d07.b1 PHD_FILE: MSMg01no117_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:40 2005
(371 letters)
>mm_chr14_12469027_12469800
Length = 774
Score = 632 bits (327), Expect = 0.0
Identities = 360/371 (97%), Gaps = 3/371 (0%)
Strand = Plus / Minus
Query: 4 ggaattc-gatatgatttacgaaagaagac-aacagcagaaaggtcatggatgattccga 61
||||||| |||||||| | |||||||||| |||||||||||||||||||||||||||||
Sbjct: 574 ggaattcagatatgataaaggaaagaagacaaacagcagaaaggtcatggatgattccga 515
Query: 62 caaagtataaataagtcagcagactctaattgggcctacaa-gtcatagtcagagtcact 120
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 514 gaaagtataaataagtcagcagactctaattggacctacaaggtcatagtcagagtcact 455
Query: 121 ttaccagggaaacatctccaggcattgagtacagccaacattaagggctgctttaccgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 454 ttaccagggaaacatctccaggcattgagtacagccaacattaagggctgctttaccaat 395
Query: 181 gtaatgatactagctagctctgtaggcatcagggctggagcttctaactttgccccttac 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 394 gtaatgatactagctagctctgtaggtatcagggctggagcttctaactttgccccttac 335
Query: 241 tgagctgaatgtatctaaactggttaattatataccctgtgaatccatttccttctctag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgagctgaatgtatctaaactggttaattatataccctgtgaatccatttccttctctag 275
Query: 301 agaaataacagcatcagcccttcactgtggagtcgttaagaaattagacggcatgcacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 274 agaaataacagcatcagcccttcactgtggagtcgttaagaaattagacggtatgcacaa 215
Query: 361 ggtgttgagta 371
|||||||||||
Sbjct: 214 ggtgttgagta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 774
Length adjustment: 9
Effective length of query: 362
Effective length of database: 765
Effective search space: 276930
Effective search space used: 276930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_d07.g1 MSMg01no117_d07.g1 CHROMAT_FILE:
MSMg01no117_d07.g1 PHD_FILE: MSMg01no117_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:41 2005
(337 letters)
>mm_chr14_12324708_12325444
Length = 737
Score = 644 bits (333), Expect = 0.0
Identities = 336/337 (99%)
Strand = Plus / Plus
Query: 1 aaggtattttcttttgactcttccactttgggtcatgaactacttggaagtatgtgttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggtattttcttttgactcttccactttgggtcatgaactacttggaagtatgtgttta 260
Query: 61 atctatgtgtattagtgaatttcctgttatatctatttcactggtctctacattagttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctatgtgtattagtgaatttcctgttatatctatttcactggtctctacattagttct 320
Query: 121 tttgcaataactgaacatactttgtaaaagttttttacttgtttggtgtgctaggaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgcaataactgaacatactttgtaaaagttttttacttgtttggtgtgctaggaattg 380
Query: 181 aattagagccttgagcagaggaggcaagcacagcttgatgctgcattgcaatcccttctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattagagccttgagcagaggaggcaagcacagcttgatgctgcattgcaatcccttctg 440
Query: 241 ttgaacacactgacacccttctaaacctaggacacagcctgtcctgatgaaagttcaaga 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgaacacactgacgcccttctaaacctaggacacagcctgtcctgatgaaagttcaaga 500
Query: 301 gatgctttgtcttgtattccatggcaggggcgtccaa 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatgctttgtcttgtattccatggcaggggcgtccaa 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
