NCCCGCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTAGGGAACACGTCATTTACAAAAACATTGAGGAGTTTGC
CAAACACTGTGGGGTTTACAGGGCCATTGGTAATTACTGTGTATAATGCA
TTCTGAACCCGCTGGCAGTGAGCTGCCTGATCTTTCTGGGCTGTGTCTTT
CAACTGAATGCTGTTTGTTTTCTACATAACAAATGACAGAGAGGGTGTTG
GTCTATTTTGTACAGAACTTAAAATTTTGCTTTAGGTTATGACAAAATAT
GTCAGTCAGCCATTATAAAACTCAAAATCATTTCAATAAGCCTCAGACAT
TATGTTATTTGGGGCAACATACAAAGGCTATAGATGTCTTGTTGCTGGCA
TGCTTGAGCTTGGCGAAGTGGCAATACTGCATTCTCTAGTACAACAGTTC
TCAACCTGTGATTGCTACGCCTTTCAGGGTCAAATGACCCTTTCATGTTG
GTTGCCTAAAACCATCAAAAAAATTACACTATGATTTTTAACAGCAAAAT
TACAGTTACTTTCTCAATCACATGCAAGAACAAAACACTACAGCCAGTTC
TACATTGGTTCCCCAATGTGTTTCACTATGTACATCTTTCTTTGCCTGCC
AAGATTCAAATCTAGTTTGACTTGACCTTTGCATTAATCTCCCTCCCTCA

NCCTCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTGGATGTTTTGAGTTAGGATCTT
TTTGCATTTTGTATTTTCTTTTGTTGTTGTGTCCATATTCCCTATGGAAT
CTTCTGCACCTGAGATTCTCTCTTTCATCTCTTGTATGCTGTTGCTGATG
CTCTTATTGATTTCTTTCCTAGGGTTTCAATCTCCAGAGTTATCTCTCTT
TGGGTTTTCTTAATTGTTTTTATTTCCCTTTTTAGATCCTGGATGGCTTT
GTTCAATTCCAACTCCTGTTTGGTAATGTTTTCCTGTAACTCTCTAAGGC
AGTTTTGTGTTTCCTCTTTAAAGGCATCTAGGTGTTCATCTGTGTTTTCC
TGTATTTTCTTCTTAAGGTCCTCCATCATTATCATAAGAAATGACTTTAA
ATCCATGTCTTGCTTTTTTCGTGTGATGGTGTATCCAGGACTTGTTATGG
TGGGAGAATTTGGTTCTGATGATGCCACATAACCTTGGTTTCTGTTGCTT
CTGTTCTTATGCTTGCCTCCTGCCATCTGTTTATCTCAAGTATTTGCTGT
CCTCAATATATCTTATTGGAGCCTGTCTTTTCTATAATCCCAGTTGATTC
AGTACTCCTCAGAGTCCAGCTTTCTCTGTGATCCTTTGCTTATG

Query= MSMg01no117_f01.b1 MSMg01no117_f01.b1 CHROMAT_FILE:
MSMg01no117_f01.b1 PHD_FILE: MSMg01no117_f01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:50 2005
         (649 letters)



>mm_chr14_11131490_11132538
          Length = 1049

 Score = 1185 bits (613), Expect = 0.0
 Identities = 637/645 (98%), Gaps = 1/645 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctagggaacac-gtcatttacaaaaacattgaggagtttgccaaacactgtgggg 63
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctagggaacaaagtcatttacaaaaacattgaggagtttgccaaacactgtgggg 263

                                                                       
Query: 64  tttacagggccattggtaattactgtgtataatgcattctgaacccgctggcagtgagct 123
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttacggggccattggtaattactgtgtataatgcattctgaacccgctggcagtgagct 323

                                                                       
Query: 124 gcctgatctttctgggctgtgtctttcaactgaatgctgtttgttttctacataacaaat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcctgatctttctgggctgtgtctttcaactgaatgctgtttgttttctacataacaaat 383

                                                                       
Query: 184 gacagagagggtgttggtctattttgtacagaacttaaaattttgctttaggttatgaca 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gacagagagggtgttggtctattttgtacagaacttaaaattttgctttaggttatgaca 443

                                                                       
Query: 244 aaatatgtcagtcagccattataaaactcaaaatcatttcaataagcctcagacattatg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaatatgtcagtcagccattataaaactcaaaatcatttcaataagcctcagacattatg 503

                                                                       
Query: 304 ttatttggggcaacatacaaaggctatagatgtcttgttgctggcatgcttgagcttggc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 504 ttatttggggcaacatacaaaggctatagatgtcttgttgctggcatgcttgagcttgga 563

                                                                       
Query: 364 gaagtggcaatactgcattctctagtacaacagttctcaacctgtgattgctacgccttt 423
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 564 gaagtggcaatactgaattctctagtacaacagttctcaacctgtgattgctatgccttt 623

                                                                       
Query: 424 cagggtcaaatgaccctttcatgttggttgcctaaaaccatcaaaaaaattacactatga 483
           ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 624 cagggtcaaatgaccctttcacgttggttgcctaaaaccatcaaaaaaattacattatga 683

                                                                       
Query: 484 tttttaacagcaaaattacagttactttctcaatcacatgcaagaacaaaacactacagc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tttttaacagcaaaattacagttactttctcaatcacatgcaagaacaaaacactacagc 743

                                                                       
Query: 544 cagttctacattggttccccaatgtgtttcactatgtacatctttctttgcctgccaaga 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cagttctacattggttccccaatgtgtttcactatgtacatctttctttgcctgccaaga 803

                                                        
Query: 604 ttcaaatctagtttgacttgacctttgcattaatctccctccctc 648
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ttcaaatctagtttgacttgacctttgcattaatctccctccctc 848


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space:   663921
Effective search space used:   663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)