Query= MSMg01no117_n17.b1 MSMg01no117_n17.b1 CHROMAT_FILE:
MSMg01no117_n17.b1 PHD_FILE: MSMg01no117_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:32 2005
(672 letters)
>mm_chr14_123403704_123404775
Length = 1072
Score = 1205 bits (623), Expect = 0.0
Identities = 654/665 (98%), Gaps = 4/665 (0%)
Strand = Plus / Minus
Query: 4 gaattctagcacctattc-c-tctaatgaaaatttctagtttcttagaaagcagtataac 61
|||||||| |||||| | | ||||||||||||||| |||||||||||||||||| ||||
Sbjct: 663 gaattctaacaccta--cacttctaatgaaaatttccagtttcttagaaagcagtgtaac 606
Query: 62 tatgtgaggtagaaacaaaactagaaacagaaactaaactggaaatccagtttcatgaat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tatgtgaggtagaaacaaaactagaaacagaaactaaactggaaatccagtttcatgaat 546
Query: 122 aggtcccaacagagacctgaaaggacaagtgggctcaaactgcatcctgggagctgacca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aggtcccaacagagacctgaaaggacaagtgggctcaaactgcatcctgggagctgacca 486
Query: 182 ggactcagcaagggactacagcctaagtcagactagcccagcaaatagtcaacactacaa 241
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 485 ggactcagcaagggactacagcctaagtcagactagtccagcaaatagtcaacactacaa 426
Query: 242 tccatccaaggtgggaggttgacactactcaggaatcaagaagactgctcttgaggtggt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tccatccaaggtgggaggttgacactactcaggaatcaagaagactgctcttgaggtggt 366
Query: 302 cacatgctacaagcctgaagaatgtgctaaaggccttgtcaaatctcctctctattctcc 361
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 365 cacatgctacaagcctgaagaatgtgttaaaggccttgtcaaatctcctctctattctcc 306
Query: 362 atggtgctccatttttcggactggaatgcagatgctgctgcctggtgcccagagaatgaa 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 atggtgctccatttttcggactggaatgcagatgctgctgcctggtgcccagagaatgaa 246
Query: 422 aggcaaaggcaaatgaggtcaaaggaaacaaaggaaatagaagcagggccagtgaaatgg 481
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 245 agtcaaaggcaaatgaggtcaaaggaaacaaaggaaatagaaacagggccagtgaaatgg 186
Query: 482 ttctgaagattaagatctttatccaagattgtccaagcctgacaatctttaggacccaca 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ttctgaagattaagatctttatccaagattgtccaagcctgacaatctttaggacccaca 126
Query: 542 gggtggaaggggaagatgaacttagaaagcatcctctgacttcaagtatacaccttggca 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gggtggaaggggaagatgaacttagaaagcatcctctgacttcaagtatacaccttggca 66
Query: 602 cacacacatatacagacacacacaataagtcaatatattaatgtaataaatatttttgta 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cacacacatatacagacacacacaataagtcaatatattaatgtaataaatatttttgta 6
Query: 662 ataaa 666
|||||
Sbjct: 5 ataaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_n17.g1 MSMg01no117_n17.g1 CHROMAT_FILE:
MSMg01no117_n17.g1 PHD_FILE: MSMg01no117_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:32 2005
(238 letters)
>mm_chr14_123250646_123251283
Length = 638
Score = 429 bits (222), Expect = e-125
Identities = 234/238 (98%)
Strand = Plus / Plus
Query: 1 agtcaccatgcttgacagcaggattctattccctgagcatctccacggcccttatttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtcaccatgcttgacagcaggattctattccctgagcatctccacggcccttatttcat 260
Query: 61 ttctttttccatagctctgtgatgtgaaggtgtgccaaactgtgacagaacagcagggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctttttccatagctctgtgatgtgaaggtgtgccaaactgtgacagaacagcagggga 320
Query: 121 tatgcacatctcctgtactgtagggaacctctgagctaggtcttgctgctttttctttct 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 321 tatgcacatctcctgtactgtagggaatctctgagctaggtcttgctgctttttccatct 380
Query: 181 tgggacatgagtcccagaatgctgtagcactttgtgtcagtgggtttcctagataaag 238
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggacatgagtccaagaatgctgtagcactttgtgtcagtgggtttcctagataaag 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
