Query= MSMg01no118_d20.b1 MSMg01no118_d20.b1 CHROMAT_FILE:
MSMg01no118_d20.b1 PHD_FILE: MSMg01no118_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:02 2005
(498 letters)
>mm_chr14_109087292_109088189
Length = 898
Score = 930 bits (481), Expect = 0.0
Identities = 490/493 (99%)
Strand = Plus / Minus
Query: 5 gaattcatgaaactttgtccagtggatgatactttgatctgcaagcactgaatctctttg 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gaattcatgaaactttgtgcagtggatgatactttgatctgcaagcactgaatctctttg 607
Query: 65 ttattgtaaactattggcattctttttaaggaaatgacctctattcactacatatctgct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ttattgtaaactattggcattctttttaaggaaatgacctctattcactacatatctgct 547
Query: 125 atctagttgaaggatttgaaccatgacatattgtctgcccacttgttagacaaagaaata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 atctagttgaaggatttgaaccatgacatattgtctgcccacttgttagacaaagaaata 487
Query: 185 tagattcgttgcatcccttcctttcattcctaattgctgttggaagttctatgtactaat 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 486 tagattcgttgcatcccttcctttcattcctaattgctgttggaagttctatgtcctaat 427
Query: 245 gaagctcatggtcagaatattttatgtctgggaatttcctgctcttggaagtttctgtgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gaagctcatggtcagaatattttatgtctgggaatttcctgctcttggaagtttctgtgg 367
Query: 305 aaaaaggagccaatatagaaaagaaatagagcaggtaacaggagagaaaaatacctgtgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaaaaggagccaatatagaaaagaaatagagcaggtaacaggagagaaaaatacctgtgt 307
Query: 365 cgtagctgaattctagatcccagatttttccaaatctcatggtctcattacctaatgatg 424
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 catagctgaattctagatcccagatttttccaaatctcatggtctcattacctaatgatg 247
Query: 425 ctctcattgagtcagcttgagctgtctgttttatgtgcaactacacacacacacacacac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ctctcattgagtcagcttgagctgtctgttttatgtgcaactacacacacacacacacac 187
Query: 485 acacacacacaca 497
|||||||||||||
Sbjct: 186 acacacacacaca 174
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_d20.g1 MSMg01no118_d20.g1 CHROMAT_FILE:
MSMg01no118_d20.g1 PHD_FILE: MSMg01no118_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:02 2005
(506 letters)
>mm_chr14_108953614_108954519
Length = 906
Score = 750 bits (388), Expect = 0.0
Identities = 478/510 (93%), Gaps = 8/510 (1%)
Strand = Plus / Plus
Query: 3 gcaggctctagatttagtgattgctcagtgttatcctcacaatgactcagacgttaaaaa 62
||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||
Sbjct: 203 gcaggctctaggtttagtgattgctccctgttatcctcacaatgactcagaagttaggaa 262
Query: 63 aactgcagaccacaagatcacaatgaatcaaaagcagctgatccagaggataaaacaagc 122
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 263 aactgcagaccacaagatcacaatgaatcaaaagcagctgatccagaggacaagacaagc 322
Query: 123 tactctccagcataagcagaactctgctaaacacacaggagatcatcatctctagcagct 182
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tactctacagcgtaagcagaactctgctaaacacacaggagatcatcatctctagcagct 382
Query: 183 tcaagtcttccggccaaataaataaatacataatgtgcggcagtgattaatgaatgaata 242
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 383 tcaagtcttccggccaaataaataaatacataacgtgcggcagtgattaatgaatgaata 442
Query: 243 ttaggatctgaaattgagggaacctagtggggaaacccccactcaattctggattcggcg 302
||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 443 ttaggatctgaaactgagggaaccta-tggggaaacccccactcaattccggattcggcg 501
Query: 303 tgcacccaaaaaatcaccaaggaccatcttgatgtaattacaggaggtactttaatgaca 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 502 tgcacccaaaaaatcaccaaggaccatcttgatgtaattacaggaggtactttaatga-a 560
Query: 363 g-agctctggaccaacatgcatcccacacaggagataacgaatattggccatgaggctc- 420
| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 ggagctccagaccaacatgcatcccacacaggagataatgaatattggccatgaggctag 620
Query: 421 -c---gaagctaggggtttttatggggtacggggcttaggggtgtggaatttagcatagt 476
| |||||||||||||||||||||||| || |||||||||||||||||| |||||||
Sbjct: 621 gcttggaagctaggggtttttatggggtaaggagcttaggggtgtggaattcagcatagc 680
Query: 477 aatacactattggcttattcaaatatcagc 506
| |||||||||||||||||||| ||||||
Sbjct: 681 gacacactattggcttattcaaacatcagc 710
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
