Query= MSMg01no119_a04.b1 MSMg01no119_a04.b1 CHROMAT_FILE:
MSMg01no119_a04.b1 PHD_FILE: MSMg01no119_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:02 2005
(297 letters)
>mm_chr14_13354241_13354937
Length = 697
Score = 540 bits (279), Expect = e-158
Identities = 291/297 (97%), Gaps = 4/297 (1%)
Strand = Plus / Plus
Query: 1 aaatcaaaagatagacatagatataaaatatacattcctttgtttagtccttggtagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatcaaaagatagacatagatataaaatatacattcctttgtttagtccttggtagaga 260
Query: 61 atctcaagtattgcactttaaaattacgttcatctaagattttgccccaagtttcaccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctcaagtattgcactttaaaattacgttcatctaagattttgccccaagtttcaccct 320
Query: 121 gcattagctacatgcccctagcaaatctgattttcaaatcctatatataaaaacaactaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 gcattagctacatgcccctagcaaatctgattttcaaatcctatatataaaattaactaa 380
Query: 181 tttttctcattcaactttggaagacttactttacagaactatttaaaagaaagcaagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttttctcattcaactttggaagacttactttacagaactatttaaaagaaagcaagaag 440
Query: 241 gaaagaaagaaagaaagatagaaatggcatatgtacttacaaaattgtgagatgggg 297
|||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaagaaagaaagaaaga----aatggcatatgtacttacaaaattgtgagatgggg 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_a04.g1 MSMg01no119_a04.g1 CHROMAT_FILE:
MSMg01no119_a04.g1 PHD_FILE: MSMg01no119_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:02 2005
(129 letters)
>mm_chr14_13489883_13490411
Length = 529
Score = 234 bits (121), Expect = 1e-66
Identities = 127/129 (98%)
Strand = Plus / Minus
Query: 1 agccgctctcataccctgtgaagtaaggcttcctcccatcagccccacaagctcttaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 agccgctctcataccctgtgaagtaaggcttcctcccatcagccccacaagctcttaata 270
Query: 61 atgtgtttgttacatagtggtacttatctctgcaaacagatgtgtgtgaacaggatgctg 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atgtgtttgttacataatggtacttatctctgcaaacagatgtgtgtgaacaggatgctg 210
Query: 121 gtgtaatca 129
| |||||||
Sbjct: 209 gcgtaatca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 129
Length of database: 529
Length adjustment: 8
Effective length of query: 121
Effective length of database: 521
Effective search space: 63041
Effective search space used: 63041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
