Query= MSMg01no119_k21.b1 MSMg01no119_k21.b1 CHROMAT_FILE:
MSMg01no119_k21.b1 PHD_FILE: MSMg01no119_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:53 2005
(549 letters)
>mm_chr14_112520873_112521821
Length = 949
Score = 990 bits (512), Expect = 0.0
Identities = 539/548 (98%), Gaps = 1/548 (0%)
Strand = Plus / Plus
Query: 3 gaattcactactaatatttcgtattgtgctacttaatgaatgaaaaa-taaaactgagat 61
||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||
Sbjct: 202 gaattcactactaatatttggtattgtgctgcttaatgaatgaaaaagtaaaactgagat 261
Query: 62 tagaatactgatctgacagtataagcaaatggctaattgtttattattatgcaggcttta 121
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 262 tagaatactgatctgacagtataagcaaatggctaattgtttattattatgtaggcttta 321
Query: 122 ttataataccattaatataaatgcatggtttgtattcattatttatatctagaactcttc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttataataccattaatataaatgcatggtttgtattcattatttatatctagaactcttc 381
Query: 182 tgagtaaatgcttgcaaataatcttaagagtatatgaaagggttgctattaccatgaaat 241
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 382 ggagtaaatgcttgcaaataatcttaacagtatatgaaaggattgctattaccatgaaat 441
Query: 242 ataaatatgaaatagaaataagaagcaagagaagtaaaaccattaaggctgtcatacaaa 301
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 442 ataaatatgaaatagaaataagaagcaagagaagtgaaaccattaaggctgtcatacaaa 501
Query: 302 gagaaaataaatagcttggaaatgtatcttaaaaaatgttattcaaagttagtattatat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gagaaaataaatagcttggaaatgtatcttaaaaaatgttattcaaagttagtattatat 561
Query: 362 atgtaaaaaatatatatttgattttaaagaagccacttccctattcattctgtagtacat 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 atgtaaaaaatatatatttgattttaaagaagccacttccctattcattctgtagtacat 621
Query: 422 tgcttactttcaaatatatttcttattaaaaaatgagtaattgttcatcacctagataat 481
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tgcttattttcaaatatatttcttattaaaaaatgagtaattgttcatcacctagataat 681
Query: 482 acatccttgaataagacagatgattgatgttaatcttattttttcatattaattttcata 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 acatccttgaataagacagatgattgatgttaatcttattttttcatattaattttcata 741
Query: 542 gccttaca 549
||||||||
Sbjct: 742 gccttaca 749
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_k21.g1 MSMg01no119_k21.g1 CHROMAT_FILE:
MSMg01no119_k21.g1 PHD_FILE: MSMg01no119_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:54 2005
(518 letters)
>mm_chr14_112597483_112598400
Length = 918
Score = 373 bits (193), Expect = e-107
Identities = 226/237 (95%)
Strand = Plus / Minus
Query: 282 tttcttaataatatatattaagtattgatatactatgataaatatagtgatgaattaaaa 341
|||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||
Sbjct: 739 tttcttaataatatatattaagtattaatgtactatgataaatgtagtgatgaattaaaa 680
Query: 342 atcaggtaataacacaaagaagttacttataagttcctgaaattatttagtagtgttcag 401
||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||
Sbjct: 679 atcagataataacacaaagaagttacatataagtttctgaaattatttagtagtgtttag 620
Query: 402 accgcttcaggttgaagtcagttcttgaggttcagcgttaacattgatattttcctggca 461
|||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||
Sbjct: 619 accgcttcaggttgaagtcagttcttgaggttcagcatttacattgataatttcctggca 560
Query: 462 atgttttctgcttttccatttttatccttgtttctaaacgttgaggtcattctttaa 518
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 559 atgttttctgcttttccatttttatccttgtttctaaactttgaggtcattctttaa 503
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
