XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGNAAATCCGCGGAATTC
TCTGCAGGGTACCAAAATGTATAGTGGTTAAAGCTGGGACCAGGACAAAC
AGGCATTAGAACTATGGGTTAAGAGTTCTCAGTGTGTAGTGTCTGTGGTT
TTAGGAATGCAGATGGGCATGGAGAAAATATTAATTCTAGTTAAACTAGA
ATTTATGAAATGTTTTTTAAAAGAAGATAATAGGGGTATGATATTATTTT
ATAATCCCACTTCTGGGTGTATAACCCGAAGAAGTGAAATCAGTATATAG
GAAAGGTAGCCACAAGGATGGATTGATGGTTAATGCCACTGGTTGCTTTT
TCAGAGGGCTTGTGTCCAATTACTAGCACCCTCATGACATCTTACAACCA
TTTGTGACACCAGTTTCAAAGGAATAGATGCCTTCTTCTGGGCTCTGGGG
GCACCAGGTATGCATGTGCTGCACAGAGACACAGGTAGGCAAAACACCAA
TTCACGTAAAAATGAATAAGTAAAAATTAAATTAAAACCTGGGAAGGTTG
CTGCTCTATGTTTGGGGAGTAATCAAACTATAGAAACTACATAAATGTCA
ATGAGTGCAATAAACCAGGCACATCAAGGCCCAGCCTGCATGCATGCATT
CATCTGTGCAACCTATAGAAGTGATCTTATAAGAGTAAGGTAGAATATAG
GCCTGGTAGGGGGCGCAGGGATGCT

ATGTGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCATGGGTACCAGGCATGCATGTGGTCCACAGAC
ATACATGAAAGCAAAAGACCCATACACATAAAATAAATTAACAAAAATTT
TAAAAATATTATCTAGTAATCACAAAATAAAACAAACTAAATAATGTCTT
CAAACGAATCAAAGATATTGAAATTTTGTTAAACCTCATATTTGGAAGAA
TAAAATAATAAACTAAACAATAAACAAATCAGATAAACATTCGCCCATAC
AAAAATGAAAATAAAAAACGTGATAACAACTATGACTGGAAATAAACCAT
CAACCTATGTGTTAGTTTACTACAGTAACAAATGGATTCATTACAGTTTT
AATTCTTGGGTCTTCTACAGATTTTTCAATAACATTTCCAAAGCTGGTTT
CTTCCCACAGGCATGCTCAGTCACAGTGCAAACTTGGCAACAGGTAGCCA
TTCACAATTGATTAAAAACATCCCTAATATTAGCAGAGTATTATATAATG
GGTCTATATTCCAGCACGCATGAATTTGAGGCAGGAGGATTTCACATAGG
AGACCAGTAACACAGACTTGCAGCCTATTGAAAATAAAAGATCTTTTCAA
AAACACTTCTCAATAAAACCCATAAGTGCACTTACATGTGTCAGATACTT
ATAAAATCTCATTTTACAAT

Query= MSMg01no119_k22.b1 MSMg01no119_k22.b1 CHROMAT_FILE:
MSMg01no119_k22.b1 PHD_FILE: MSMg01no119_k22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:54 2005
         (552 letters)



>mm_chr14_100872826_100873777
          Length = 952

 Score = 1044 bits (540), Expect = 0.0
 Identities = 549/552 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtggttaaagctgggaccaggacaaacaggcattagaactatgggttaagagttctcagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtggttaaagctgggaccaggacaaacaggcattagaactatgggttaagagttctcagt 260

                                                                       
Query: 61  gtgtagtgtctgtggttttaggaatgcagatgggcatggagaaaatattaattctagtta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtagtgtctgtggttttaggaatgcagatgggcatggagaaaatattaattctagtta 320

                                                                       
Query: 121 aactagaatttatgaaatgttttttaaaagaagataataggggtatgatattattttata 180
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 aactagaatttatgaaatgttttttaaaagaagatgataggggtatgatattattttata 380

                                                                       
Query: 181 atcccacttctgggtgtataacccgaagaagtgaaatcagtatataggaaaggtagccac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcccacttctgggtgtataacccgaagaagtgaaatcagtatataggaaaggtagccac 440

                                                                       
Query: 241 aaggatggattgatggttaatgccactggttgctttttcagagggcttgtgtccaattac 300
           |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggatggagcgatggttaatgccactggttgctttttcagagggcttgtgtccaattac 500

                                                                       
Query: 301 tagcaccctcatgacatcttacaaccatttgtgacaccagtttcaaaggaatagatgcct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagcaccctcatgacatcttacaaccatttgtgacaccagtttcaaaggaatagatgcct 560

                                                                       
Query: 361 tcttctgggctctgggggcaccaggtatgcatgtgctgcacagagacacaggtaggcaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcttctgggctctgggggcaccaggtatgcatgtgctgcacagagacacaggtaggcaaa 620

                                                                       
Query: 421 acaccaattcacgtaaaaatgaataagtaaaaattaaattaaaacctgggaaggttgctg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acaccaattcacgtaaaaatgaataagtaaaaattaaattaaaacctgggaaggttgctg 680

                                                                       
Query: 481 ctctatgtttggggagtaatcaaactatagaaactacataaatgtcaatgagtgcaataa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctctatgtttggggagtaatcaaactatagaaactacataaatgtcaatgagtgcaataa 740

                       
Query: 541 accaggcacatc 552
           ||||||||||||
Sbjct: 741 accaggcacatc 752


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space:   510564
Effective search space used:   510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no119_k22.g1 MSMg01no119_k22.g1 CHROMAT_FILE:
MSMg01no119_k22.g1 PHD_FILE: MSMg01no119_k22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:54 2005
         (528 letters)



>mm_chr14_100985873_100986800
          Length = 928

 Score =  975 bits (504), Expect = 0.0
 Identities = 522/528 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   catgggtaccaggcatgcatgtggtccacagacatacatgaaagcaaaagacccatacac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 catgggtaccaggcatgcatgtggtccacagacatacatgaaagcaaaagacccatacac 747

                                                                       
Query: 61  ataaaataaattaacaaaaattttaaaaatattatctagtaatcacaaaataaaacaaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ataaaataaattaacaaaaattttaaaaatattatctagtaatcacaaaataaaacaaac 687

                                                                       
Query: 121 taaataatgtcttcaaacgaatcaaagatattgaaattttgttaaacctcatatttggaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 686 taaataatgtcttcaaacgaatcaaagatattgaaattttgttaaacctcatatttgaaa 627

                                                                       
Query: 181 gaataaaataataaactaaacaataaacaaatcagataaacattcgcccatacaaaaatg 240
           |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 626 gaataaaataataaactaaacaataaacaaatcagataaacattcaaccatacaaaaatg 567

                                                                       
Query: 241 aaaataaaaaacgtgataacaactatgactggaaataaaccatcaacctatgtgttagtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aaaataaaaaacgtgataacaactatgactggaaataaaccatcaacctatgtgttagtt 507

                                                                       
Query: 301 tactacagtaacaaatggattcattacagttttaattcttgggtcttctacagatttttc 360
           |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tactacagtaatgaatggattcattacagttttaattcttgggtcttctacagatttttc 447

                                                                       
Query: 361 aataacatttccaaagctggtttcttcccacaggcatgctcagtcacagtgcaaacttgg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aataacatttccaaagctggtttcttcccacaggcatgctcagtcacagtgcaaacttgg 387

                                                                       
Query: 421 caacaggtagccattcacaattgattaaaaacatccctaatattagcagagtattatata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 caacaggtagccattcacaattgattaaaaacatccctaatattagcagagtattatata 327

                                                           
Query: 481 atgggtctatattccagcacgcatgaatttgaggcaggaggatttcac 528
           ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 326 atgggtctatattccagcacgcatgaacttgaggcaggaggatttcac 279


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space:   475524
Effective search space used:   475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)