Query= MSMg01no120_d23.b1 MSMg01no120_d23.b1 CHROMAT_FILE:
MSMg01no120_d23.b1 PHD_FILE: MSMg01no120_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:37 2005
(576 letters)
>mm_chr14_58808872_58809840
Length = 969
Score = 1011 bits (523), Expect = 0.0
Identities = 561/577 (97%), Gaps = 9/577 (1%)
Strand = Plus / Minus
Query: 1 agtttgaactagattggatgtatccatttctgggaaggaagcagtactgaagaaatgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 agtttgaactagattggatgtatccatttctgggaaggaagcagtactgaagaaatgttt 710
Query: 61 ctgggctcatttcccaaagactccacctcctttcagtagtgccaccctgaagacagagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ctgggctcatttcccaaagactccacctcctttcagtagtgccaccctgaagacagagcc 650
Query: 121 cttagcacatgagcctttgggaagtattcaaaagtcaaactacaaaagacaaaatactga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 cttagcacatgagcctttgggaagtattcaaaagtcaaactacaaaagacaaaatactga 590
Query: 181 ggaattaagatctatagccagtgtactgctagcaacctcttgggggcggggggtggggtg 240
||||||||||||||||||||||||||||||||||||||||| |||||| |||| |
Sbjct: 589 ggaattaagatctatagccagtgtactgctagcaacctctt------ggggggagggg-g 537
Query: 241 gg-gggcaatgtcttattcaccggacagatctttttcaagttttctttggagcttgtaat 299
|| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ggagggcaatg-cagattcaccggacagatctttttcaagttttctttggagcttgtaat 478
Query: 300 tggttgtaggatacttagcaaatccaaagaaactgttttctgttttgtctctctcttatt 359
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tggttgtaggatacttaacaaatccaaagaaactgttttctgttttgtctctctcttatt 418
Query: 360 ttcaaataaatctcatagtgcaggtgtgactgagcttgtgccagctaccatcctcctaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ttcaaataaatctcatagtgcaggtgtgactgagcttgtgccagctaccatcctcctaaa 358
Query: 420 atcccaggtgctgtccaaaatggaaagatttgaagcccagctatagttggacatttcttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 atcccaggtgctgtccaaaatggaaagatttgaagcccagctatagttggacatttcttt 298
Query: 480 gaccacagcgctttcacctccacatttattaacctgcgtggactagcccacacgggccct 539
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 297 gaccacagcgctttcacgtccacatttattaacctgtgtggactagcccacacgggccct 238
Query: 540 ccctatgagacttttgccttactggaggacaagaacg 576
|||||||||||||||||||||||||||||||| ||||
Sbjct: 237 ccctatgagacttttgccttactggaggacaaaaacg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 969
Length adjustment: 10
Effective length of query: 566
Effective length of database: 959
Effective search space: 542794
Effective search space used: 542794
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no120_d23.g1 MSMg01no120_d23.g1 CHROMAT_FILE:
MSMg01no120_d23.g1 PHD_FILE: MSMg01no120_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:37 2005
(414 letters)
>mm_chr14_58663621_58664433
Length = 813
Score = 793 bits (410), Expect = 0.0
Identities = 413/414 (99%), Gaps = 1/414 (0%)
Strand = Plus / Plus
Query: 1 tcacgctgtcctggttgtggcctcagtgtgactgaccagctgcctcatgctcctgctacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacgctgtcctggttgtggcctcagtgtgactgaccagctgcctcatgctcctgctacc 260
Query: 61 atgccttacctgctgtgaaggaccgtatcttcagactgtgagcccaagcaagcccttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgccttacctgctgtgaaggaccgtatcttcagactgtgagcccaagcaagcccttcct 320
Query: 121 gtcttaagttgccttctccaggtctttggtccccacaccagcagccaggataatcactaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcttaagttgccttctccaggtctttggtccccacaccagcagccaggataatcactaa 380
Query: 181 caaatgacagctgcctcagctctgtgaaaagtacaatcactttctacccccagacctttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaatgacagctgcctcagctctgtgaaaagtacaatcactttctacccccagacctttg 440
Query: 241 agcaggttgtattttttccccttctctgagctctgtgcaaagaaagtactgactagggaa 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcaggttgtattttt-ccccttctctgagctctgtgcaaagaaagtactgactagggaa 499
Query: 301 gggactacaggaaggactgtgttgagtgaaaggccgttcattgtagttttgtttagaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gggactacaggaaggactgtgttgagtgaaaggccgttcattgtagttttgtttagaaca 559
Query: 361 gtgaaaagcagttggtaattgaggagaaaacagaaaatatggcacatttgtagt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtgaaaagcagttggtaattgaggagaaaacagaaaatatggcacatttgtagt 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 813
Length adjustment: 9
Effective length of query: 405
Effective length of database: 804
Effective search space: 325620
Effective search space used: 325620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
