Query= MSMg01no124_c14.b1 MSMg01no124_c14.b1 CHROMAT_FILE:
MSMg01no124_c14.b1 PHD_FILE: MSMg01no124_c14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:53 2005
(356 letters)
>mm_chr14_28040613_28041368
Length = 756
Score = 654 bits (338), Expect = 0.0
Identities = 344/346 (99%)
Strand = Plus / Minus
Query: 11 cttccctggggaggtgtaacactgtctatctctccttacaaagtgccaatagcaaagcaa 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 cttccctggggaggtgtaacactgtctatctctccttacaaagtgccaatagcaaagcaa 697
Query: 71 agtaggattccaccagagttcaactggggagacaaggaggtactagagtcttaaagcaag 130
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 696 agtaggattccaccagagttcaactggggagacaaggaggtactagggtcttaaagcaag 637
Query: 131 gataaggagttccctctaattacatgggtgacctgaaagcagctgcactgcaaagtcttt 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gataaggagttccctctaattacatgggtgacctgaaagcagctgcactgcaaagtcttt 577
Query: 191 attcagcacaggtgacagcttcccataaccacaagatcaatgtcccttcagttaactacc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 attcagcacaggtgacagcttcccataaccacaagatcaatgtcccttcagttaactacc 517
Query: 251 tcctatatatgccaataccacatagaagacttccgaccgcatcaacctactgaaggcagg 310
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 516 tcctatatatgccaataccacatagaagacttccgaccgcatcaacctactgaaggtagg 457
Query: 311 ttaggcagaactggttagggcagaactgcatacaaatggctagaag 356
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ttaggcagaactggttagggcagaactgcatacaaatggctagaag 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_c14.g1 MSMg01no124_c14.g1 CHROMAT_FILE:
MSMg01no124_c14.g1 PHD_FILE: MSMg01no124_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:53 2005
(344 letters)
>mm_chr14_27884513_27885256
Length = 744
Score = 594 bits (307), Expect = e-174
Identities = 334/345 (96%), Gaps = 5/345 (1%)
Strand = Plus / Plus
Query: 1 gcaccaaatggagtttgaggtctgcctgggctagggaccctgtctcaaaag-aaaaaaaa 59
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 200 gcaccaaatggagtttgaggtctgcctgggctagggaccctgtctcaaaagaaaaaaaaa 259
Query: 60 aaatcttccctaggcacggtgatctgtaatctcagcagaggacaggtggatctctactat 119
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaatcttgactaggcacggtgatctgtaatctcagcagaggacaggtggatctctactat 319
Query: 120 gccagcctggttttccatagccagttccaggccagctaagcaacacaaaccaaacaaacc 179
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gccagcctggctttccatagccagttccaggccagctaagcaacacaaaccaaacaaacc 379
Query: 180 atcaaaaaaacaagagtgctcccattcagagcagctaaggaactttgagaaagctggtaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atcaaaaaaacaagagtgctcccattcagagcagctaaggaactttgagaaagctggtaa 439
Query: 240 caacgttcagtggacagactacacagtacacaccaggagtgaaacttgtaaagcactcat 299
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 440 caacgttcagtggacagactacacagtacacaccaggagtgaaacttgaaaagcactcat 499
Query: 300 acaaaagaactgaggt----gtatgtgtgtgttccttttcttttt 340
|||||||||||||||| || ||||||||||| ||||||||||
Sbjct: 500 acaaaagaactgaggtctgtgtgtgtgtgtgttctttttcttttt 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
