Query= MSMg01no124_d05.b1 MSMg01no124_d05.b1 CHROMAT_FILE:
MSMg01no124_d05.b1 PHD_FILE: MSMg01no124_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:58 2005
(167 letters)
>mm_chr14_60460917_60461483
Length = 567
Score = 253 bits (131), Expect = 3e-72
Identities = 140/143 (97%)
Strand = Plus / Minus
Query: 1 ggcaaattccatcatcagcctaaatccatacaccccacactttgagtgccccccaagagc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 311 ggcaaattccatcatcagcctaaatccatacaccccacactttgagtggcccccaagagc 252
Query: 61 aggtagatgagaggagggagctgacatagtcaacacagtgcattttcagtttctctctct 120
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 251 aggtagatgagaggagggagctgacatagtcaacacagtgcaccttcagtttctctctct 192
Query: 121 ctctctctctctctctctctctc 143
|||||||||||||||||||||||
Sbjct: 191 ctctctctctctctctctctctc 169
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 167
Length of database: 567
Length adjustment: 8
Effective length of query: 159
Effective length of database: 559
Effective search space: 88881
Effective search space used: 88881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no124_d05.g1 MSMg01no124_d05.g1 CHROMAT_FILE:
MSMg01no124_d05.g1 PHD_FILE: MSMg01no124_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:59 2005
(329 letters)
>mm_chr14_60315198_60315926
Length = 729
Score = 507 bits (262), Expect = e-148
Identities = 310/332 (93%), Gaps = 13/332 (3%)
Strand = Plus / Plus
Query: 1 ggccacacaccaggcagtagattgctgttgacagtagactttgttatactttgttgttag 60
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 201 ggccacacaccaggcagtagattgctgttgacagtagacttttttatactttgttgttgg 260
Query: 61 tgccttgactttcgtaaccagagcacccgcaagttttatcggtaaacctcgttgttgcag 120
|| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 tggtttgactttcgtaaccagagcacccgcaagttttatcggtaaaccttgttgttgcag 320
Query: 121 aatcccagatagtgattcagggagttactcgtttctacaaagcaacttttcgtctatccc 180
|||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 321 aatcccagatagtgattcagggagtt-------tctacaaagcaactcctcgtctatccc 373
Query: 181 caccagtagacaaggtggtgctttctagggcttagaccttaaacacactaaaatgcacaa 240
|||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 374 caccagtagacaagatggtgctttttagggcttagaccttaaacacactaaaatgcacaa 433
Query: 241 atgttaaaccccacagagttttggttactgtctacgtatg--tttta-tgtctgctcaca 297
|||||||||||||||||||||||||||||||||||||||| | | ||||||||||||
Sbjct: 434 atgttaaaccccacagagttttggttactgtctacgtatgagt---agtgtctgctcaca 490
Query: 298 ccaagctataagatacttctattaccccagag 329
||||||||||||||||||||||||||||||||
Sbjct: 491 ccaagctataagatacttctattaccccagag 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
