Query= MSMg01no125_g18.b1 MSMg01no125_g18.b1 CHROMAT_FILE:
MSMg01no125_g18.b1 PHD_FILE: MSMg01no125_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:27 2005
(467 letters)
>mm_chr14_28636815_28637681
Length = 867
Score = 872 bits (451), Expect = 0.0
Identities = 463/467 (99%)
Strand = Plus / Minus
Query: 1 attgctaggtctgagatgttaggttggaaacaaactccaaaatgatgctgatactgctat 60
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 667 attgctgggtctgagatgttaggttggaaactaactccaaaatgatgctgatactgctat 608
Query: 61 ccaaagcccagcatggccctgcgtagagtgccttctgtcaaacccacaaggagaaggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ccaaagcccagcatggccctgcgtagagtgccttctgtcaaacccacaaggagaaggttt 548
Query: 121 gtgcgggcactgatctcttttatttacttccagcagggaagtgattgatggccaatgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gtgcgggcactgatctcttttatttacttccagcagggaagtgattgatggccaatgatg 488
Query: 181 cctgctagattgtaaccacatgatttgcaaatccggccctagatatttactgtgtgaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cctgctagattgtaaccacatgatttgcaaatccggccctagatatttactgtgtgaatc 428
Query: 241 atcctgcaaccagccataacttccaggaattcgtggacacgaaaccacactcttcggaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atcctgcaaccagccataacttccaggaattcgtggacacgaaaccacactcttcggaaa 368
Query: 301 gcctcctctaaaaggaaagcttaaaggatacccaaggggtatgaagtgaaggatttgaag 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gcctcccctaaaaggaaagcttaaaggatacccaaggggtatgaagtgaaggatttgaag 308
Query: 361 atcaattcaacaattacctcatagtgacaatctccaaagactgtgtgtgatataccagac 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atcaattcaacaattacctcatagtgacaatctccaaagactgtgtgtgatataccagaa 248
Query: 421 actgactagaaagaggcctgaaaactcatgaaaaggacagacagccc 467
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 actgactagaaagaggcctgaaaactcatgaaaaggacagacagccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_g18.g1 MSMg01no125_g18.g1 CHROMAT_FILE:
MSMg01no125_g18.g1 PHD_FILE: MSMg01no125_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:27 2005
(515 letters)
>mm_chr14_28455529_28456444
Length = 916
Score = 949 bits (491), Expect = 0.0
Identities = 510/517 (98%), Gaps = 3/517 (0%)
Strand = Plus / Plus
Query: 1 atatgaattagaggcaacatcctcataggttcatgaagccatctgttattttgctcgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 atatgaattagaggcaacatcctcataggttcatgaagccatctgttatttcgctcgagt 260
Query: 61 tttaagcagaatttacccacgggcttccagctttattcatgaggcacttttaaagtggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaagcagaatttacccacgggcttccagctttattcatgaggcacttttaaagtggaa 320
Query: 121 ggtgttggtcacctaatctctttgggggtcatagtttctcttatgtcagcaatatctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtgttggtcacctaatctctttgggggtcatagtttctcttatgtcagcaatatctgtt 380
Query: 181 tttgtgcagcttgagagtatgaatattttacccttcttggtgttgtataatacagatata 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 tttgtgcagcttgagagtatgaatattttacccttcttggtgttgtatattacagatata 440
Query: 241 cacaggcaggtttttttaaagagcttattaggaactctactgatggactctgacttggct 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacaggcaggtttttt-aaagagcttattaggaactctactgatggactctgacttggct 499
Query: 301 cagtaagagtatttaaaacagcaagagcttatcattaccttatttcctaaagacactttt 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctgtaagagtatttaaaacagcaagagcttatcattaccttatttcctaaagacactttt 559
Query: 361 atgggtgagaggaaaagctcaaaaatggtcttcttcaggtcagtaatgggaagtagacgt 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atgggtgagaggaatagctcaaaaatggtcttcttcaggtcagtaatgggaagtagacgt 619
Query: 421 tattccattattgattactgaatgaagctggtctttattttttcaaaaattcattttaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tattccattattgattactgaatgaagctggtctttattttttcaaaaattcattttaga 679
Query: 481 gaattaaaaaaaaaaa--cccaaccccatcagggtgg 515
|||||||||||||||| |||||||||||||||||||
Sbjct: 680 gaattaaaaaaaaaaaaacccaaccccatcagggtgg 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 916
Length adjustment: 10
Effective length of query: 505
Effective length of database: 906
Effective search space: 457530
Effective search space used: 457530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
