Query= MSMg01no125_i18.b1 MSMg01no125_i18.b1 CHROMAT_FILE:
MSMg01no125_i18.b1 PHD_FILE: MSMg01no125_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:37 2005
(540 letters)
>mm_chr14_82170058_82170997
Length = 940
Score = 781 bits (404), Expect = 0.0
Identities = 456/480 (95%), Gaps = 14/480 (2%)
Strand = Plus / Minus
Query: 75 tggtatgcatttg--gtttttttatttttaattttatgt-------tgt---tgca--tg 120
||||||| ||||| ||||||||||||||||||||||| ||| |||| ||
Sbjct: 940 tggtatgtatttgttttttttttatttttaattttatgttggtgcatgtgagtgcagttg 881
Query: 121 tatggagggtagaagatgatgtgaggcaccctggtgctggggctgaactgtcgcccacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 880 tatggagggtagaagatgatgtgaggcaccctggtgctggggctgaactgttgcccacat 821
Query: 181 gaggggagtgctgggaactgaactatggctccctgcaagaagcaggatgtgattttagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 820 gaggggagtgctgggaactgaactatggctccctgcaagaagcaggatgtgatcttagtt 761
Query: 241 tttgaaccttcctttaatcctcagttaaattttcaatagatatacttgggtatttcaagt 300
||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 760 tttgaaccttcttttaatcctcagttaaattttcaattgatatccttgggtatttcaagt 701
Query: 301 agaaaatacatgctaatacttattttcatacctggtataaataaccggtaataacttggt 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 700 agaaaatacatgctaatacttattttcatacctggtataaatacccggtaataacttggt 641
Query: 361 tggagtagtacaatactgagaatttgttttagtacattcagattttaaattatatgtttg 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tggagtagcacaatactgagaatttgttttagtacattcagattttaaattatatgtttg 581
Query: 421 ggatattttagaggaggtgatgacttttataaataaaggtcttacgtattctttgcaaat 480
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 580 ggatattttagaggaggtgatgacttttataaataaaggtcttatgtattctttgcaaat 521
Query: 481 tatatttcatgggttaatggtttcaaattgcaacaaactcaagttattttttgtctgacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tatatttcatgggttaatggtttcaaattgcaacaaactcaagttattttttgtctgacc 461
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 940
Length adjustment: 10
Effective length of query: 530
Effective length of database: 930
Effective search space: 492900
Effective search space used: 492900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_i18.g1 MSMg01no125_i18.g1 CHROMAT_FILE:
MSMg01no125_i18.g1 PHD_FILE: MSMg01no125_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:37 2005
(534 letters)
>mm_chr14_82009299_82010232
Length = 934
Score = 1017 bits (526), Expect = 0.0
Identities = 532/534 (99%)
Strand = Plus / Plus
Query: 1 tcatgatgcacagcctgaggaataagcaagatctgtgcccagagacacatatggaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatgatgcacagcctgaggaataagcaagatctgtgcccagagacacatatggaataaa 260
Query: 61 tcatcaaagatctttttatgaagatatatttgtgggttttatataaatcataagatttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatcaaagatctttttatgaagatatatttgtgggttttatataaatcataagatttat 320
Query: 121 ttatattgaacaaatcacttttatgctactgagagaaagtctctactattatatttggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttatattgaacaaatcacttttatgctactgagagaaagtctctactattatatttggta 380
Query: 181 gtttaaaacatggctgcaggtgtaatgttatgaggaataactctttaagcatttgtctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtttaaaacatggctgcaggtgtaatgttatgaggaataactctttaagcatttgtctaa 440
Query: 241 acataaatgagtagttaatatgaatggttaagaataatttcagattttgctgatgtgtgg 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 acataaatgagtagttaatatggatggttaagaataatttcagattttgctgatgtgtgg 500
Query: 301 aaaatatactagctcttatttgttaactttgcttttaagaaaatactccagaaatacaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaatatactagctcttatttgttaactttgcttttaagaaaatactccagaaatacaga 560
Query: 361 tgataaatagcagagactgacataaactcctatacaagttatttccagatgtttttagga 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgataaatggcagagactgacataaactcctatacaagttatttccagatgtttttagga 620
Query: 421 aagtttcaaatagaaggatagtttttaattgcaattcacattataaattgaaagtatggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagtttcaaatagaaggatagtttttaattgcaattcacattataaattgaaagtatggt 680
Query: 481 attcataatgcttcaaatgagctagtgatgtttatgactgcaaaaatagcttgc 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attcataatgcttcaaatgagctagtgatgtttatgactgcaaaaatagcttgc 734
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
