Query= MSMg01no126_b22.b1 MSMg01no126_b22.b1 CHROMAT_FILE:
MSMg01no126_b22.b1 PHD_FILE: MSMg01no126_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:23 2005
(645 letters)
>mm_chr14_27133373_27134419
Length = 1047
Score = 1104 bits (571), Expect = 0.0
Identities = 629/653 (96%), Gaps = 13/653 (1%)
Strand = Plus / Plus
Query: 5 gaattca-gtagaggcatctgtccctcccctgattggctaagagaaaagtgtcacccttg 63
||||||| |||||||||| ||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 196 gaattcaagtagaggcatttgtccctcccctgattggctaggagaaaagtgtcatccttg 255
Query: 64 tcatacaggcagagcaatggccttaataagattctagctctgattagtgaggggctgaga 123
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 256 tcatacaggcagagcaatggccttaataagattctagccctgattagtgaggggctgaga 315
Query: 124 gaaggttggctggaggggccgagcaggagtaccattcactcgcgccctctgc------g- 176
||||| |||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 316 gaagggtggctgtaggggccgagcaggagtaccattcactcgcgccctctgcccctctgc 375
Query: 177 gacagtggcagtagagagtgagcagcaggtgaggctgcatcttcatcagtgacagctcag 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gacagtggcagtagagagtgagcagcaggtgaggctgcatcttcatcagtgacagctcag 435
Query: 237 gtcctgttccctggccagaagctggagcagcagctctgccttggcgcttcctgcctc--- 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gtcctgttccctggccagaagctggagcagcagctctgccttggcgcttcctgcctcctc 495
Query: 294 atccagtagctgttgccccaggctcagtgccttcagggccacgacctaggttttatgctg 353
||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||
Sbjct: 496 atccagtagctgttgccccaggctcagtgccctcggggccacgacctaggtttcatgctg 555
Query: 354 aggttccataatggctagcctgccccatcccacctagctt-tgtgggataatcgccaaaa 412
||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||
Sbjct: 556 aggttccataatggctagcctgccccatcccacctag-ttctgtgggataatagccaaaa 614
Query: 413 ctctctgagacatcctgcataccgagcttggcagcagcctaggacactgtagtcaagagg 472
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 615 ctctctgagacatcctgcatactgagcttggcagcagcctaggacactgtagtcaagagg 674
Query: 473 tggcagggctcacaatgagagcaacagagggagatattctagtttatatgaggaatgaga 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tggcagggctcacaatgagagcaacagagggagatattctagtttatatgaggaatgaga 734
Query: 533 aacctgatgctctgcttctgtggacgaaaacctagcagccccatccacatgaaaaataga 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aacctgatgctctgcttctgtggacgaaaacctagcagccccatccacatgaaaaataga 794
Query: 593 ggacaatttgtgggaagtttgttttctccttcaagtcagtgaatcccagggaa 645
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ggacaatttgtgggaagtttgttttctccttcaagtcagtgaatcccagggaa 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1047
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1037
Effective search space: 658495
Effective search space used: 658495
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_b22.g1 MSMg01no126_b22.g1 CHROMAT_FILE:
MSMg01no126_b22.g1 PHD_FILE: MSMg01no126_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:23 2005
(532 letters)
>mm_chr14_27281536_27282467
Length = 932
Score = 644 bits (333), Expect = 0.0
Identities = 360/369 (97%), Gaps = 2/369 (0%)
Strand = Plus / Minus
Query: 1 cctgtgaacttgccttgcagcgaagtctgagtaatactgaagatgaatgtacccacctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cctgtgaacttgccttgcagcgaagtctgagtaatactgaagatgaatgtacccacctga 310
Query: 61 aagagatgaatgagcgcactcaggaagagttaagagaattagccaataaatacaatggag 120
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 309 aagagatgaatgagcgcactcaggaagagttgagagaattagccaataaatataatggag 250
Query: 121 cagttaatgaaattaaagatttatctgataaattaaaggtatgtatactagttccttttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cagttaatgaaattaaagatttatctgataaattaaaggtatgtatactagttccttttg 190
Query: 181 tattgctgtggtaggataccatgaacagaatactttatagaaggaagaggttacttgggc 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tgttgctgtggtaggataccatgaacagaatactttatagaaggaagaggttacttgggc 130
Query: 241 ttggggttccagaggagcctttcaccatcatggcgagggagtgtggcaggaggcagcct- 299
|||||||||||||||||||||||||||||||||||||| |||||||||| || || | |
Sbjct: 129 ttggggttccagaggagcctttcaccatcatggcgaggaagtgtggcagcagtcatc-ta 71
Query: 300 tggcagctggagctggaagcttagagatcactgggaatggcttgagcctctgaaacatcc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tggcagctggagctggaagcttagagatcactgggaatggcttgagcctctgaaacatcc 11
Query: 360 aagtctata 368
|||||||||
Sbjct: 10 aagtctata 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
