Query= MSMg01no126_o24.b1 MSMg01no126_o24.b1 CHROMAT_FILE:
MSMg01no126_o24.b1 PHD_FILE: MSMg01no126_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:31 2005
(558 letters)
>mm_chr14_100891558_100892516
Length = 959
Score = 951 bits (492), Expect = 0.0
Identities = 541/558 (96%), Gaps = 5/558 (0%)
Strand = Plus / Minus
Query: 4 gaattcaaagacatgtacacttcagt-tcttcctggaaaattgcaaatttaatgggaaaa 62
||||||||||||||||| |||||| | |||||||| ||||||||||||||||||||||||
Sbjct: 759 gaattcaaagacatgtagacttca-tctcttcctgaaaaattgcaaatttaatgggaaaa 701
Query: 63 cactccacttgataaaaattgtattacctccactttattaaaaatgtattatcaatacat 122
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 700 cactcaacttgataaaaattttattacctccactttattaaaaatgtattatcaatacat 641
Query: 123 tgggttaaacagttattttaacttaactcctgggattgagacccgggagaaagcagtgta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tgggttaaacagttattttaacttaactcctgggattgagacccgggagaaagcagtgta 581
Query: 183 gctgggatctggataatgaatgctttctggaggacatggtttcctgagattatgttgaat 242
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 580 gctgggatctggataataaatgctttctggaggacatggttccctgagattatgttgaat 521
Query: 243 gctaagggttggtggtgaacagcagctaataggtgtatggttagaatgcttgaaattatg 302
||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 520 gctgagggttggtggtgaacagcagctaataggtgtat-gttggaatgcttgaaattatg 462
Query: 303 ctgttactgagtgaatgattattggttacacattttgtatcactaagaacaatgaaaacc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ctgttactgagtgaatgattattggttacacattttgtatcactaagaacaatgaaaacc 402
Query: 363 actactgatctttaggctaatctatgatgtgatttgctcatttgaaggaggttttatcat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 actactgatctttaggctaatctatgatgtgatttgctcatttgaaggaggttttatcat 342
Query: 423 ccattcctgtcataaaatgtggtttaacctaattctgacttgaattagctta--tttttt 480
|||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||
Sbjct: 341 ccattcctgtcataaaatgtggattaacctaattctgacttgaattagtttatttttttt 282
Query: 481 tctctagccatctcaatcactaaatagtaacaggccttatcagactcacacatcaacgag 540
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 281 tctctagtcatctcaatcactaaatagtaacaggccttatcagagtcacacatcaacgag 222
Query: 541 cagttgtctttctcctag 558
||||||||||||||||||
Sbjct: 221 cagttgtctttctcctag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 959
Length adjustment: 10
Effective length of query: 548
Effective length of database: 949
Effective search space: 520052
Effective search space used: 520052
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_o24.g1 MSMg01no126_o24.g1 CHROMAT_FILE:
MSMg01no126_o24.g1 PHD_FILE: MSMg01no126_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:31 2005
(449 letters)
>mm_chr14_100807496_100808344
Length = 849
Score = 837 bits (433), Expect = 0.0
Identities = 445/449 (99%)
Strand = Plus / Plus
Query: 1 atgacatttctctttcatctttcacattttaaaagcaggctagcactagcattcttacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgacatttctctttcatctttcacattttaaaagcaggctagcactagcattcttacct 260
Query: 61 tctcatttaatcttgtagacttatataatatgattttgcatccaaatatagttatactat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcatttaatcttgtagacttatataatatgattttgcatccaaatatagttatactat 320
Query: 121 gcatttgcatgtatttaaccttgatccttcagatattactcaataaaatagtttccaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatttgcatgtatttaaccttgatccttcagatattactcaataaaatagtttccaaat 380
Query: 181 gatagggccaagagtagtaaggacagtctgtcattccattaagggtctaaatcttgccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatagggccaagagtagtaaggacagtctgtcattccattaagggtctaaatcttgccat 440
Query: 241 tgaactatccctgggaccctgaaggctttctcaggctattgctcaagtggaacagcagtg 300
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 tgaactatccctgggacgctgaaggctttctcaggctactgctcaagtggaacagcagtg 500
Query: 301 gaagagaaacgtatttctgatcaaaatgaaactagttgtgtgatggcaggtataaaacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaagagaaacgtatttctgatcaaaatgaaactagttgtgtgatggcaggtataaaacag 560
Query: 361 tctgcatcaatatccaggtatttcagtgtagagcagtctgggtcaatgttcagtgtcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctgcatcaatatccaggtatttcagtgtagagcagtctgggtcaatgttcagtgtcttt 620
Query: 421 gaacagtgtctttgctgattctgtcttgg 449
|| |||||||||||||||||| |||||||
Sbjct: 621 gagcagtgtctttgctgattccgtcttgg 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
