Query= MSMg01no128_b04.b1 MSMg01no128_b04.b1 CHROMAT_FILE:
MSMg01no128_b04.b1 PHD_FILE: MSMg01no128_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:03 2005
(399 letters)
>mm_chr14_96327225_96328022
Length = 798
Score = 706 bits (365), Expect = 0.0
Identities = 386/395 (97%), Gaps = 5/395 (1%)
Strand = Plus / Plus
Query: 5 gaattcttgttaattcctcacctcaaataattttacaaggttgccctcttctggtcacaa 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgttaatt-cttacctcaaataattttacaaggttgccctcttctggtcacaa 263
Query: 65 taattatttcatttctttttatctatagtattttattacaaagtaacagtaaacctaatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taattatttcatttctttttatctatagtattttattacaaagtaacagtaaacctaatt 323
Query: 125 tataataatctgacatcaaatatgtaagtaaacagacactatcaaatagcaaacaccaaa 184
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 324 tataataatctgacatcaaatatgtaagtaaacagacattatcaaatagcaaacaccaaa 383
Query: 185 aaggtctttgcaatatttctattgcatattgccttccattaaagtccacttacctaggat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaggtctttgcaatatttctattgcatattgccttccattaaagtccacttacctaggat 443
Query: 245 tttttctgttttttctacttcaccagtagtctgaaaattcatatgtcaagcttggtaata 304
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttttcttttttttctgcttcaccagtagtctgaaaattcatatgtcaagcttggtaata 503
Query: 305 agttaataaatgaactgaatgcttgaggtgttccagatggacttaaagtgccaatgcttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agttaataaatgaactgaatgcttgaggtgttccagatggacttaaagtgccaatgcttc 563
Query: 365 catttgccaaataaaaggggggggggtgactcata 399
|||||||||||||||||||||| |||||||||
Sbjct: 564 catttgccaaataaaagggggg----tgactcata 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 798
Length adjustment: 9
Effective length of query: 390
Effective length of database: 789
Effective search space: 307710
Effective search space used: 307710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_b04.g1 MSMg01no128_b04.g1 CHROMAT_FILE:
MSMg01no128_b04.g1 PHD_FILE: MSMg01no128_b04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:03 2005
(257 letters)
>mm_chr14_96418143_96418801
Length = 659
Score = 422 bits (218), Expect = e-122
Identities = 246/256 (96%), Gaps = 4/256 (1%)
Strand = Plus / Minus
Query: 1 agcatctggtagaagtaattaacttctcagaaggtcagacaactcacaaaggatgccata 60
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 455 agcatctggtagacgtaattaacttctcagaaggtcagacaactcagaaaggatgccata 396
Query: 61 tggtagagaaggttacaacaaaattcaaaagtaagatctttgc--aaagagttctgtgaa 118
||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 395 tgg-agagaaggttacaacaaaattcaaaagtaagatctttgcaaaaagagttctgtgaa 337
Query: 119 atgtcatgggacattatgatgaggtattccagtaacaaaaatg-ttggaaattttacact 177
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 336 atgtcatgggacattatgatgaggtattccaggaacaaaaatgtttggaaattttacact 277
Query: 178 acgtatgatggactagattttatttatttcacaaaataaaaattgaataatccatctcag 237
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 276 aagtatgatggactagattttatttatttcagaaaataaaaattgaataatccatctcag 217
Query: 238 cacatacagagcatgc 253
|||||||| |||||||
Sbjct: 216 cacatacatagcatgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 257
Length of database: 659
Length adjustment: 9
Effective length of query: 248
Effective length of database: 650
Effective search space: 161200
Effective search space used: 161200
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
