Query= MSMg01no128_b21.b1 MSMg01no128_b21.b1 CHROMAT_FILE:
MSMg01no128_b21.b1 PHD_FILE: MSMg01no128_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:06 2005
(510 letters)
>mm_chr14_47684537_47685446
Length = 910
Score = 948 bits (490), Expect = 0.0
Identities = 505/510 (99%)
Strand = Plus / Minus
Query: 1 tgggtcaggctctagcgctaccatccttggcaggactttctctctcttcttaaaaatctg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 710 tgggtcaggctctagcgctaccatccttggcaggactttctctctctttttaaaaatctg 651
Query: 61 aacaactgatgagttggctttttctctcaactttgacctaaacacagattgctctttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 aacaactgatgagttggctttttctctcaactttgacctaaacacagattgctctttcaa 591
Query: 121 atagttcctgtcaaaccctggggtccgaggcagcagctgagatccaagcagtggtgggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 atagttcctgtcaaaccctggggtccgaggcagcagctgagatccaagcagtggtgggag 531
Query: 181 aaatgttaggaagttgaaattagtgcctttcattctctgagagtgtgcagtgactctggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aaatgttaggaagttgaaattagtgcctttcattctctgagagtgtgcagtgactctggg 471
Query: 241 ctttgtcttgttctcagtcctggtatttagccaggcctacagaaggggatctgagggcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ctttgtcttgttctcagtcctggtatttagccaggcctacagaaggggatctgagggcac 411
Query: 301 tgaataagtacaggaaaagcagaggtcagtggggagccacgccccagccaggccctgccc 360
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 410 tgaataagtacaggaaaagcagaggtcagtggggagccatgtggcagccaggccctgccc 351
Query: 361 cacatgctccaatctctccttcctgtgcaacgaatattaactcatttagaccaccggttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cacatgctccaatctctccttcctgtgcaacgaatattaactcatttagaccaccggttt 291
Query: 421 cttcgaattgtcgctcaaaggaaactggggtcaatttgaaaaaaaaatgcaaatagcatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cttcgaattgtcgctcaaaggaaactggggtcaatttgaaaaaaaaatgcaaatagcatt 231
Query: 481 ttaaacaagagaaacaaaaacacacattag 510
||||||||||||||||||||||||||||||
Sbjct: 230 ttaaacaagagaaacaaaaacacacattag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 910
Length adjustment: 10
Effective length of query: 500
Effective length of database: 900
Effective search space: 450000
Effective search space used: 450000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_b21.g1 MSMg01no128_b21.g1 CHROMAT_FILE:
MSMg01no128_b21.g1 PHD_FILE: MSMg01no128_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:06 2005
(284 letters)
>mm_chr14_47513590_47514273
Length = 684
Score = 518 bits (268), Expect = e-151
Identities = 280/284 (98%), Gaps = 2/284 (0%)
Strand = Plus / Plus
Query: 1 cagaggccggatcggggaaacctcttcccacttcctcagctttctccc-caaagcacaga 59
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 201 cagaggccggatcggggaaacctcttcccacttcctcagctttctctcacaaagcacaga 260
Query: 60 cattggaatttctgaaacggcatatcctgatctgtcagtagaattggttacatgtgtgca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattggaatttctgaaacggcatatcctgatctgtcagtagaattggttacatgtgtgca 320
Query: 120 gcatacgtacatgagccacattgacaatcactgtatgcattcctgtctgtgcacgggcac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatacgtacatgagccacattgacaatcactgtatgcattcctgtctgtgcacgggcac 380
Query: 180 cagtgtcactgcggcagtcaagagtgtgactacaaagatgctgtcggggaacttgtgcat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtgtcactgcggcagtcaagagtgtgactacaaagatgctgtcggggaacttgtgcat 440
Query: 240 ttttgattgagttgggggaacagaggcagttaacaaagccacca 283
|||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttgag-gagttgggggaacagaggcagttaacaaagccacca 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
