Query= MSMg01no128_m06.b1 MSMg01no128_m06.b1 CHROMAT_FILE:
MSMg01no128_m06.b1 PHD_FILE: MSMg01no128_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:58 2005
(546 letters)
>mm_chr14_71915895_71916840
Length = 946
Score = 955 bits (494), Expect = 0.0
Identities = 537/566 (94%), Gaps = 25/566 (4%)
Strand = Plus / Plus
Query: 6 ggaattcaactccttcctaa-tactaagccatttctccagccctgtaattctctcttaaa 64
||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggaattcaactccctcttaaatactaagccatttctccagccctgtaattctctcttaaa 240
Query: 65 gggcttacttctac-tacaacctcatactgagtactgagagtgaacaatacaacctggat 123
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggcttacttctaaatacaacctcatactgagtactgagagtgaacaatacaacctggat 300
Query: 124 attttcaaggagttcaacagtgcccatagttaactgatcatgagatttacccagaatcct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attttcaaggagttcaacagtgcccatagttaactgatcatgagatttacccagaatcct 360
Query: 184 ttttttaaatatataaacttcagtccttctctctaagaaccaaaagatatacagtcttga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttttttaaatatataaacttcagtccttctctctaagaaccaaaagatatacagtcttga 420
Query: 244 catccaaatattttagaacttcttgtgtgacaggcatgcttggatatggatgggaccctc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catccaaatattttagaacttcttgtgtgacaggcatgcttggatatggatgggaccctc 480
Query: 304 ttctctagagtattttcgtgggccatcatctttagtgatgtctgtgtttaagaatgggga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttctctagagtattttcgtgggccatcatctttagtgatgtctgtgtttaagaatgggga 540
Query: 364 tgtcagaaagggagaaggcagttttttttttttt-----------------------ggc 400
|||||||||||||||||||||||||||||||||| |||
Sbjct: 541 tgtcagaaagggagaaggcagttttttttttttttttttttttttttttttttttttggc 600
Query: 401 ctgggagatgactcgaagaagctttgaaaagaacacagattgccaaatatgacccagatt 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctgggagatgactcgaagaagctttgaaaagaacacagattgccaaatatgacccagatt 660
Query: 461 tatctccaaaaatttccagatacctcttaatgtatgtatgaaacaccgagaaagatgtaa 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tatctccaaaaatttccagatacctcttaatgtatgtatgaaacaccgagaaagatgtaa 720
Query: 521 gagaatcagatacctacctctgccag 546
||||| ||||||||||||||||||||
Sbjct: 721 gagaagcagatacctacctctgccag 746
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space: 501696
Effective search space used: 501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_m06.g1 MSMg01no128_m06.g1 CHROMAT_FILE:
MSMg01no128_m06.g1 PHD_FILE: MSMg01no128_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:58 2005
(335 letters)
>mm_chr14_72075085_72075819
Length = 735
Score = 621 bits (321), Expect = 0.0
Identities = 330/333 (99%)
Strand = Plus / Minus
Query: 1 cttctcaaacttctcagtaaaataaaatctttggtccaaggaaatacttctaatttacac 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 cttctcaaacttctcagaaaaataaaatctttggtccaaggaaatacttctaatttacac 474
Query: 61 aagacataatcataagtagtctccagacaggaacaaccatcgacacttcctgcagtgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 aagacataatcataagtagtctccagacaggaacaaccatcgacacttcctgcagtgtgg 414
Query: 121 acagtgttgggaattctaacagtgcttcataagtaaacagccagtgttggatttaatcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 acagtgttgggaattctaacagtgcttcataagtaaacagccagtgttggatttaatcag 354
Query: 181 cctgagtctgagtcttgatatgctcagtgttgggaggaaccaaggtaataaaataggtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cctgagtctgagtcttgatatgctcagtgttgggaggaaccaaggtaataaaataggtca 294
Query: 241 gagtcatgtgagctgttatcataggactggaaccccaaatcttcagaatagtttaaagat 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 293 gagtcatgtgagctgttatcataggactggaaccccaaatcttcagactagtttaaagat 234
Query: 301 gaaggatccaaattcttagtgcatcttctctta 333
|||| ||||||||||||||||||||||||||||
Sbjct: 233 gaagaatccaaattcttagtgcatcttctctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
