Query= MSMg01no129_d21.b1 MSMg01no129_d21.b1 CHROMAT_FILE:
MSMg01no129_d21.b1 PHD_FILE: MSMg01no129_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:35 2005
(274 letters)
>mm_chr14_85888697_85889370
Length = 674
Score = 507 bits (262), Expect = e-148
Identities = 268/270 (99%)
Strand = Plus / Plus
Query: 5 gaattccttacattatgcttaattttcaaatagtataagttaaatgcttaatttaacatc 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttacattctgcttaattttcaaatagtataagttaaatgcttaatttaacatc 264
Query: 65 ttggaaattctgacgctaaatgtttgaaagaagctgacttataaccaagacgggatgtga 124
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttggaaattctgaggctaaatgtttgaaagaagctgacttataaccaagacgggatgtga 324
Query: 125 cgtgtggccttctgattgagcacgtcatggtatctgtgacagacaaatgtgtgcttcatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgtgtggccttctgattgagcacgtcatggtatctgtgacagacaaatgtgtgcttcatt 384
Query: 185 gtaagatattactaacctggagtatcttgtttgtcttaacaatttagattgaattttaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtaagatattactaacctggagtatcttgtttgtcttaacaatttagattgaattttaca 444
Query: 245 tttttccttccaccgtaaaatgagaaggca 274
||||||||||||||||||||||||||||||
Sbjct: 445 tttttccttccaccgtaaaatgagaaggca 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no129_d21.g1 MSMg01no129_d21.g1 CHROMAT_FILE:
MSMg01no129_d21.g1 PHD_FILE: MSMg01no129_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:35 2005
(499 letters)
>mm_chr14_86046932_86047830
Length = 899
Score = 826 bits (427), Expect = 0.0
Identities = 482/501 (96%), Gaps = 4/501 (0%)
Strand = Plus / Minus
Query: 1 cactcagtccttttattccatgccaggaggattgcggaagggcctagcccaatagctgtt 60
|||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 699 cactcagtccttttattccatgccaggaggattgtggaagggcctagctgaatagctgtt 640
Query: 61 tttagtgttctgtttctctcataaaaatgtttctcaaaattagaaattatgcttttcacc 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 639 tttagtgttctgtttctctcat-aaaatgtttctcaaaattagaaattatgcttttcacc 581
Query: 121 aagcaagg--cacacatacacacacacaccttgcatgaactcagtacatactagatacat 178
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aagcaaggcacacacacacacacacacaccttgcatgaactcagtacatactagatacat 521
Query: 179 gaatgaaaaattaaagtgtttgtatttgagtgactgaattacttatataaaggatgctat 238
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 520 gaatgaaaaattaaagtgtttctatttgagtggctgaattacttatataaaggatgctat 461
Query: 239 ttcaaacacagtattgatggaagatgggaaaaatgcagaggtgaggttcctttgtgctag 298
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 460 ttcaaacacagtattgatggaagatgggaaagatgcagagatgaggttcctttgtgctag 401
Query: 299 atatattatgattatttaaaaaaatgttttgaccaagaagatttacatacataaatttaa 358
| ||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||
Sbjct: 400 acatattatgattatttaaaaaa-tgttttgaacaagaagatttatatacataaatttaa 342
Query: 359 ggatgaaatgagtttacagatgacaaattaaatgacttggtatttcttagttagctatat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aaatgaaatgagtttacagatgacaaattaaatgacttggtatttcttagttagctatat 282
Query: 419 gtgtacacacatgaatgtttccacatgtgcattactaattaggtaatagaaatatacaga 478
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 281 gtgtacacacatgaatgtttccacatgtgcattactaactaggtaagagaaatatacaga 222
Query: 479 tcatatggacagccatcattg 499
|||||||||||||||||||||
Sbjct: 221 tcatatggacagccatcattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|