Query= MSMg01no129_f23.b1 MSMg01no129_f23.b1 CHROMAT_FILE:
MSMg01no129_f23.b1 PHD_FILE: MSMg01no129_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:45 2005
(536 letters)
>mm_chr14_85473444_85474379
Length = 936
Score = 673 bits (348), Expect = 0.0
Identities = 375/384 (97%)
Strand = Plus / Minus
Query: 1 agactcctctttcccaaaagctactaggcaaaatattagtctattgctatcttactatgt 60
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 385 agactcctctttcccaaaagctactaggtaaaatattagtctattgttatcttactatgt 326
Query: 61 gttcatttgtaataatttccacattgatatacattcactgtactgatattgtgcatgtcc 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 325 gttcatttgtaataatttccacattgatatacatttactgtactgatattgtgcatgtcc 266
Query: 121 attccagaaatattagattgttaatctcctttttgaatgaaaaattaatccttatatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attccagaaatattagattgttaatctcctttttgaatgaaaaattaatccttatatctt 206
Query: 181 tgtcatttttaatttgttattttatttatttacaattcaaatggtatccaccttcttggt 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 205 tgtcatttttaatttgttattttatttatttacaattcaaacggtatccaccttcctggt 146
Query: 241 ttcccctctgcaaaccccctatcacattcccctttcccatacttctgtgaggaagttcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 145 ttcccctctgcaaaccccctatcacattcccctttcccatacttctgtgaggaagctcta 86
Query: 301 acacctacccatcctctcacagccctagtgtttctctacattggggcattgagccttcac 360
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 85 acacctacccatcctctcacagccctagtgcttctctacactggggcattgagccttcac 26
Query: 361 aggaccaagggcctaccctcccat 384
|||||||||||||| |||||||||
Sbjct: 25 aggaccaagggcctcccctcccat 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no129_f23.g1 MSMg01no129_f23.g1 CHROMAT_FILE:
MSMg01no129_f23.g1 PHD_FILE: MSMg01no129_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:45 2005
(619 letters)
>mm_chr14_85391029_85392047
Length = 1019
Score = 1129 bits (584), Expect = 0.0
Identities = 611/620 (98%), Gaps = 1/620 (0%)
Strand = Plus / Plus
Query: 1 caaccaccttaaagttcagatgccaacatacctggcacaacataaacaccattttaggtt 60
||||| || ||||||||||||||||||||||||||||||||| ||| | |||||||||||
Sbjct: 201 caacctccctaaagttcagatgccaacatacctggcacaacagaaatagcattttaggtt 260
Query: 61 cagatttacatggaatcacgcaacttaacaaaagttgaatgcagtaccaataatttttgt 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagatttacatgggatcacgcaacttaacaaaagttgaatgcagtaccaataatttttgt 320
Query: 121 agacttcaagataaactatgacgtgaatcattcttgattaatgatagaaattcaagacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agacttcaagataaactatgacgtgaatcattcttgattaatgatagaaattcaagacca 380
Query: 181 ggcattcaaattgactttagttttcagtttttatactgctaacttagctgagcaaatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcattcaaattgactttagttttcagtttttatactgctaacttagctgagcaaatgat 440
Query: 241 atatttacaagtcacataatataaataatatatttacaggagttcatagctctcaaattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atatttacaagtcacataatataaataatatatttacaggagttcatagctctcaaattc 500
Query: 301 ctgaaacctactagtttcttggaacattcagttttctcactatccatcccctggctaatt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 ctgaaacctactagtttcttggaacattcagttttctcactatccatccccttgctaatt 560
Query: 361 ttctttaataaatctaaggtcaggattgagagaagatactggtattgtgaagaaggtaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctttaataaatctaaggtcaggattgagagaagatactggtattgtgaagaaggtaga 620
Query: 421 tttatgagctgagactttcagggtcaatttaatctaagcatttatattttaatttttagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttatgagctgagactttcagggtcaatttaatctaagcatttatattttaatttttagg 680
Query: 481 tgttaagtaataacaatggtgttttt-aatggcttgattttgagctatgaaaaggaagct 539
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 681 tgttaagtaataacaatggtgttttttaatggcttgattttgagctatgaaaaggaagct 740
Query: 540 aatgtgtaatggactactagacatgtaagaagctactaattagaagatattttaatttgc 599
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 741 aatgtgtaatggactactagacatgtaagaagcgactaattagaagatattttaatttgc 800
Query: 600 taaggcacagtaagtgggac 619
||||||||||||||||||||
Sbjct: 801 taaggcacagtaagtgggac 820
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
