Query= MSMg01no129_k05.b1 MSMg01no129_k05.b1 CHROMAT_FILE:
MSMg01no129_k05.b1 PHD_FILE: MSMg01no129_k05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:07 2005
(361 letters)
>mm_chr14_47158891_47159651
Length = 761
Score = 650 bits (336), Expect = 0.0
Identities = 352/362 (97%), Gaps = 9/362 (2%)
Strand = Plus / Minus
Query: 5 gaattctcagactt-----ttccttaatgccaagtctgaaacaacatacctgttttgtat 59
|||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 580 gaattctcagacttaaaaa----ttaatgccaagtctgaaacaacatacctgttttgtat 525
Query: 60 gacattgcttggaaatttctgagtcacacccggcagcatgtgtatgcccaaatcctagag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gacattgcttggaaatttctgagtcacacccggcagcatgtgtatgcccaaatcctagag 465
Query: 120 ccaggtccttgggtgttgaaagacattgctgtgcttaggggtaaacctgtcatcatggct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ccaggtccttgggtgttgaaagacattgctgtgcttaggggtaaacctgtcatcatggct 405
Query: 180 gtgaacccaagacaataaagaacttgtctgaatttgatggccaattagagcatttgtttc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gtgaacccaagacaataaagaacttgtctgaatttgatggccaattagagcatttgtttc 345
Query: 240 catgtttgtttcttttacaaggccaagttcactgtcattggtggataggagctgatggtg 299
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 344 catgtttgtttcttttacaaggccaagttcactgtcagtggtggataggagctgatggtg 285
Query: 300 gtaggggattggtgtttatcctttctgttgttctagaactctcaggaactggtgatttga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gtaggggattggtgtttatcctttctgttgttctagaactctcaggaactggtgatttga 225
Query: 360 ga 361
||
Sbjct: 224 ga 223
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no129_k05.g1 MSMg01no129_k05.g1 CHROMAT_FILE:
MSMg01no129_k05.g1 PHD_FILE: MSMg01no129_k05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:07 2005
(279 letters)
>mm_chr14_47073497_47074175
Length = 679
Score = 524 bits (271), Expect = e-153
Identities = 277/279 (99%)
Strand = Plus / Plus
Query: 1 gattggtcttgagtactgtgcctatcctggtctactctgctttccccagagacagtgggg 60
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 gattggtcttgagtactgtgcctatcctggtctactctgctttggccagagacagtgggg 260
Query: 61 tcagcgagtttacagtgtaatttctggtaaaatgtactgaaggataactacgcacattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagcgagtttacagtgtaatttctggtaaaatgtactgaaggataactacgcacattta 320
Query: 121 tttgctttgtatatatgtgtgctgtgctttgtatatgtgtgtgtttctgaggagcagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgctttgtatatatgtgtgctgtgctttgtatatgtgtgtgtttctgaggagcagata 380
Query: 181 gctcacctggatcattaatgtcctaagctttactctctgtatttttcagaccaagtgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctcacctggatcattaatgtcctaagctttactctctgtatttttcagaccaagtgtat 440
Query: 241 aaaaacctctcgcctaccacctgacactaaggggcatag 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaacctctcgcctaccacctgacactaaggggcatag 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
