Query= MSMg01no130_c20.b1 MSMg01no130_c20.b1 CHROMAT_FILE:
MSMg01no130_c20.b1 PHD_FILE: MSMg01no130_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:51 2005
(322 letters)
>mm_chr14_21620579_21621300
Length = 722
Score = 588 bits (304), Expect = e-172
Identities = 313/316 (99%)
Strand = Plus / Plus
Query: 5 gaatttgaacggatacaggacattcaagtgtaaatgtctgatgggcactatggtaactca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaatttgaacggatacaggacattcaagtgtaaatgtctgatgggcactatggtaactca 264
Query: 65 ggcctgggaccttggtgcctcaggaccttccttagagtccagaaacttggaccctgcctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggcctgggaccttggtgcctcaggaccttccttagagtccagaaacttggaccctgcctt 324
Query: 125 tctcccttgcctatgagcccacaacagccagataaccctactttaattctcatattttta 184
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 tctcccttgcctatgagcccacaatagccagataaccctactttaattctcatattttta 384
Query: 185 ttcatctccttatcatctattttagtctcttatgtgtagttttttctttatggggctgga 244
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 385 ttcatctccttatcatctattttagtctcttatatgtagttttttctttatggggctgga 444
Query: 245 gagatggctccgtggtggagagcactggttgctcttccaggggacctgggtttaattcac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagatggctccgtggtggagagcactggttgctcttccaggggacctgggtttaattcac 504
Query: 305 agcacccttgtgttgg 320
|||| |||||||||||
Sbjct: 505 agcatccttgtgttgg 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_c20.g1 MSMg01no130_c20.g1 CHROMAT_FILE:
MSMg01no130_c20.g1 PHD_FILE: MSMg01no130_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:51 2005
(830 letters)
>mm_chr14_21685206_21686435
Length = 1230
Score = 1549 bits (801), Expect = 0.0
Identities = 828/845 (97%), Gaps = 15/845 (1%)
Strand = Plus / Minus
Query: 1 ctgtttccgggatgtcttgggcgaatggttc------------c-c--ctctgctctgct 45
||||||||||||||||||||||||||||||| | | ||||||||||||
Sbjct: 1119 ctgtttccgggatgtcttgggcgaatggttctgctctgctctgctctgctctgctctgct 1060
Query: 46 ctgctctgctctgctctgctctgctctgcattctaacgtggacacttaggaaacaggctc 105
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1059 ctgctctgctctgctctgctctgctctgcattctaacatggacacttaggaaacaggctc 1000
Query: 106 tttagaagaatttagctctctaacagtgcagttttggatgtagggagaagggtggatcct 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 tttagaagaatttagctctctaacagtgcagttttggatgtagggagaagggtggatcct 940
Query: 166 tctaagagtgctaagattttaggtacaagggtcatcttgtctctgttctcagagttaaga 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 tctaagagtgctaagattttaggtacaagggtcatcttgtctctgttctcagagttaaga 880
Query: 226 ctgtgggcaagatgggaaactccagtggggatgactgagtctagatcttcatagctttca 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 ctgtgggcaagatgggaaactccagtggggatgactgagtctagatcttcatagctttca 820
Query: 286 tggtctgggataagatcacagcttgttgaaatacccaattaaaataaaatagcaactaga 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 tggtctgggataagatcacagcttgttgaaatacccaattaaaataaaatagcaactaga 760
Query: 346 agttaaatcagagacacagacagcaaccagttaaaaattgaccctaagactcaaaaccaa 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 agttaaatcagagacacagacagcaaccagttaaaaattgaccctaagactcaaaaccaa 700
Query: 406 aggtctacaggatttgaatctctcaggaattcaagtgctcagtaacaaagaattcctgag 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 aggtctacaggatttgaatctctcaggaattcaagtgctcagtaacaaagaattcctgag 640
Query: 466 atgaaggcggccctttgccccatcctgtgggcaaaggcctgcaaccacccaggggttaca 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 atgaaggcggccctttgccccatcctgtgggcaaaggcctgcaaccacccaggggttaca 580
Query: 526 ggtaaggttttggcattccagagttcctggaatgccagagcagtgaactaggtgtggggt 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ggtaaggttttggcattccagagttcctggaatgccagagcagtgaactaggtgtggggt 520
Query: 586 gaccgagtgttcgcgcttgaccgaggcaaaggtaatatgttacagtataattcgaagaga 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gaccgagtgttcgcgcttgaccgaggcaaaggtaatatgttacagtataattcgaagaga 460
Query: 646 cttgtgagaacaacagattgaggcattgagctcttggacatctctctcatgtctctgatc 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 cttgtgagaacaacagattgaggcattgagctcttggacatctctctcatgtctctgatc 400
Query: 706 tccacgcttccgcaagttacaattcttggaaattatccattgatcaaaaatgtcaagcat 765
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tccacacttccgcaagttacaattcttggaaattatccattgatcaaaaatgtcaagcat 340
Query: 766 gggtgtcatggctcagatttcaggacatgtgtgtgaagaggtggcttacttgacttcata 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gggtgtcatggctcagatttcaggacatgtgtgtgaagaggtggcttacttgacttcata 280
Query: 826 ggcat 830
|||||
Sbjct: 279 ggcat 275
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 830
Length of database: 1230
Length adjustment: 10
Effective length of query: 820
Effective length of database: 1220
Effective search space: 1000400
Effective search space used: 1000400
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
