Query= MSMg01no132_p18.b1 MSMg01no132_p18.b1 CHROMAT_FILE:
MSMg01no132_p18.b1 PHD_FILE: MSMg01no132_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:40 2005
(628 letters)
>mm_chr14_46845084_46846111
Length = 1028
Score = 1208 bits (625), Expect = 0.0
Identities = 627/628 (99%)
Strand = Plus / Plus
Query: 1 tgactttggaaaattatgcctcaataaactggagaacctagaacaaaacagattcatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgactttggaaaattatgcctcaataaactggagaacctagaacaaaacagattcatttc 260
Query: 61 tgaaaacttagggattgctaagattgaacaaagacagtatagcactctaaactcattaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaaaacttagggattgctaagattgaacaaagacagtatagcactctaaactcattaat 320
Query: 121 aatgagcaatgagattgtttaaaaacatctcaggaccagacagcttcactgctcagcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgagcaatgagattgtttaaaaacatctcaggaccagacagcttcactgctcagcttt 380
Query: 181 accaggcttaaagaagagttcatggcaatgctcactcctcagtctatgcatcgaaggagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accaggcttaaagaagagttcatggcaatgctcactcctcagtctatgcatcgaaggagg 440
Query: 241 aaagaaagggatgtttccaaacgcatcctgtgaaatgactgcagagccaagactcacact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagaaagggatgtttccaaacgcatcctgtgaaatgactgcagagccaagactcacact 500
Query: 301 agacagaagccgaatgacacaagagaaagcagcagagccaaatccctcctgaacatggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agacagaagccgaatgacacaagagaaagcagcagagccaaatccctcctgaacatggac 560
Query: 361 actgaacccagcaattaagagccgtttggtggaagaggtgtcagttgatgagcccctaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actgaacccagcaattaagagccgtttggtggaagaggtgtcagttgatgagcccctaat 620
Query: 421 aagctgtgctttgtcctccctcccatgctcaggcaagaaactctaattaaaatcaatgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagctgtgctttgtcctccctcccatgctcaggcaagaaactctaattaaaatcaatgag 680
Query: 481 ccacacacaaacagaagatgtgaatgtgggggagaggcctgttgagaagaagggctttgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccacacacaaacagaagatgtgaatgtgggggagaggcctgttgagaagaagggctttgg 740
Query: 541 tcagaaaggggaaggaggggggatggtgatgaaagcaactcanacctactacagtgtgcg 600
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 741 tcagaaaggggaaggaggggggatggtgatgaaagcaactcaaacctactacagtgtgcg 800
Query: 601 aaacagtcaaaagataatgttctacaac 628
||||||||||||||||||||||||||||
Sbjct: 801 aaacagtcaaaagataatgttctacaac 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_p18.g1 MSMg01no132_p18.g1 CHROMAT_FILE:
MSMg01no132_p18.g1 PHD_FILE: MSMg01no132_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:40 2005
(571 letters)
>mm_chr14_46968444_46969414
Length = 971
Score = 1096 bits (567), Expect = 0.0
Identities = 570/571 (99%), Gaps = 1/571 (0%)
Strand = Plus / Minus
Query: 1 aattagcatttctttttcttttcctttcttccttccttttctttgtttttgtttgtttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 aattagcatttctttttcttttcctttcttccttccttttctttgtttttgtttgtttgt 838
Query: 61 ttgtttgtttgttttttgttttttgagacaggatttctctgtatagccctggctgttgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 ttgtttgtttgttttttgttttttgagacaggatttctctgtatagccctggctgttgta 778
Query: 121 gaccaggctgatcttgaactcagaaatctgcctgcttctgcctcctgagtgctgggatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 gaccaggctgatcttgaactcagaaatctgcctgcttctgcctcctgagtgctgggatta 718
Query: 181 aaggcatgcaccaccacacccagcttagttagcatttcaattgttttaattgtagctatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 aaggcatgcaccaccacacccagcttagttagcatttcaattgttttaattgtagctatg 658
Query: 241 ggcccagtctctttaatttatgattagaataacccacagacatttggtctgtagctgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ggcccagtctctttaatttatgattagaataacccacagacatttggtctgtagctgttt 598
Query: 301 taagaaaacaactcttaaatgtgttactgttgcaaaaagtatcaactctacctgcgcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 taagaaaacaactcttaaatgtgttactgttgcaaaaagtatcaactctacctgcgcaaa 538
Query: 361 cagcaagtctgaaacaaatcaatccttagggcttgcattataatattcctgcccaccttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 cagcaagtctgaaacaaatcaatccttagggcttgcattataatattcctgcccaccttc 478
Query: 421 catctataaaaatttgtatttccaataatagtaatataattgttttttacagattcatta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 catctataaaaatttgtatttccaataatagtaatataattgttttttacagattcatta 418
Query: 481 tcaagaggggatgaggaagaggggaaaggagagggagagggaaatgagagaaagaatgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tcaagaggggatgaggaagaggggaaaggagagggagagggaaatgagagaaagaatgct 358
Query: 541 aaatataaaaaaactccttttgatgtatgga 571
|||||| ||||||||||||||||||||||||
Sbjct: 357 aaatat-aaaaaactccttttgatgtatgga 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
