Query= MSMg01no133_e11.b1 MSMg01no133_e11.b1 CHROMAT_FILE:
MSMg01no133_e11.b1 PHD_FILE: MSMg01no133_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:03 2005
(303 letters)
>mm_chr14_105427173_105427875
Length = 703
Score = 520 bits (269), Expect = e-152
Identities = 295/309 (95%), Gaps = 9/309 (2%)
Strand = Plus / Minus
Query: 1 gaagccaacatcactgtgatgacagatggcctccccagatacttaccaaggacatctgct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 452 gaagccaacatcactgtgatgacagatggcctccccagatacttaccaaggaaatctgct 393
Query: 61 acagaacaactttgtgaggtagatcttcacgaagaaggaaaacaataacctcatcttcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 acagaacaactttgtgaggtagatcttcacgaagaaggaaaacaataacctcatcttcgg 333
Query: 121 aaagcattttgaaggagcttcatataatttaattacttgtttgaaaacacaatttagcta 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 332 aaagcattttgaaggagcttcatataatttaattacttgtttgaaaacactatttagcta 273
Query: 181 aagatgtgcttcgcaggaatccccaagcatttagcaagtacctgaaatgccccgagaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aagatgtgcttcgcaggaatccccaagcatttagcaagtacctgaaatgccccgagaata 213
Query: 241 gcgtctgtattaatgaggatggtgatgatgatgatatgataatgatga---------tga 291
|||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 212 ttgtctgtattaatgaggatggtgatgatgatgatatgatgatgatgacgataatgatga 153
Query: 292 tggtggtgg 300
|||||||||
Sbjct: 152 tggtggtgg 144
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no133_e11.g1 MSMg01no133_e11.g1 CHROMAT_FILE:
MSMg01no133_e11.g1 PHD_FILE: MSMg01no133_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:03 2005
(546 letters)
>mm_chr14_105281631_105282576
Length = 946
Score = 917 bits (474), Expect = 0.0
Identities = 524/542 (96%), Gaps = 4/542 (0%)
Strand = Plus / Plus
Query: 7 aattccactgtggagtcaggtagcaacatatttagatattcccctattggtacatgtgta 66
||||||||||||| ||||||||||||| |||||||||||| |||||||||| | |||||
Sbjct: 207 aattccactgtggggtcaggtagcaacttatttagatattttcctattggtatacgtgta 266
Query: 67 acatgctcccattcatgagaaggcatgt--tggtagtccacaaataaacatctatctgcc 124
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 267 acatgctcccattcatgagaaggc--gtaatggtagtccacaaataaacatctatctgcc 324
Query: 125 ttttgtccttgccctgctatttcttcagacttcaggagtggggcaaaattaatggttatt 184
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 ttttgtgcttgccctgctatttctccagacttcaggagtggggcaaaattaatggttatt 384
Query: 185 ttgaaaattttcacattattaaagatattttcagcttattttcctgaaatgtttcaaagt 244
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgaaatttttcacattattaaagatattttcagcttattttcctgaaatgtttcaaagt 444
Query: 245 cacccacctacagtattttgaatgttggcttcactacactcttggcagtactggctactt 304
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 445 cacccacctacagtattttgaatgttgacttcactacactcttggcagtactggctactt 504
Query: 305 taacaatttagcatcataaagaaaatgattgggttaaaaaaataaagtaaataagaaagg 364
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 505 taacaatttagcatcataaagaaaagggttgggttaaaaaaataaagtaaataagaaagg 564
Query: 365 aagggaagaagggaaaataaaggtagttttgttttgttttgcattttaactgctcatgaa 424
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagggaagaaggggaaataaaggaagttttgttttgttttgcattttaactgctcatgaa 624
Query: 425 gttaactttcttcattattcatttgcatttgttcttttaagaacctacttttgactttat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gttaactttcttcattattcatttgcatttgttcttttaagaacctacttttgactttat 684
Query: 485 atttaatgtaaaggcattcatcgtatctttggaatatatttcatgtgtaagtcatttact 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atttaatgtaaaggcattcatcgtatctttggaatatatttcatgtgtaagtcatttact 744
Query: 545 ag 546
||
Sbjct: 745 ag 746
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space: 501696
Effective search space used: 501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
