ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAAAATACGCGGAA
TTCTTTGCTTATGTTACGAACCCCACTTTTTAATGGGGTTATTTGAATTT
CTGGAGTCCAGCTTTTTGAGCTCTTTGCATATATTGGATATTACTCCCCT
CTCAGATTTAGGATTGGTAAAAATCCTTTTCCAATCTGTTGTTGGCCTTT
TTGACCAGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTTATGAGGTCTC
ATTTGTCAATTCTTGATCTTAAAGCACAATCCTTTCTTTTCTGTTTAAGA
ATTTTTCCCCTGTGCCCATATCTCTGAGGCTTTTCCCCACATTGTCCTCT
ATTAATTTCAGTGCCTCTGGTATTATGTGGAGGCCTTTGATCCATTTAAA
TTTTGAGTTTTGTACAAGCAGATTTAGAAGGTACAATTTGCATTCTTCTT
CATGATATCCACCAGCTGTTTCAGCCCCTTTTGTTGAACATGCTGACTTT
CTGGACCACTTGACTGATTTTAACTCCCCTGCCCAATTATAACATGACCC
TTAGGCGAGTGTTATTCTATTCAGAGACTTACAAATACATATTCCCAGAG
TAACAACTTTTCCTGTCACTGATCCCCACAACCATAGCACGATTTATTAT
TACCACTTTGCATCTGGATCCTAATTTCCTATAACTTCTCACGTTTATGC
CCGCACTCCCAATAACACATTTCACTCCTTATCCCGACATATACTATTAA
TATCCTCCCCCCC

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCAAATTCTCTTTGGAAAACTTACTTT
CTTACTTTCTGTCTAAGGCTACTAACTCTTTACTGCATAAGACTCCCAAA
ATAATCTGCATCACATCTTTCTTTCTTTCTATTTCTATCTCAGCTATATA
TCTCCCACAAAAACAACAACACACTCCAATCTAAGTTGGGCATGTATTTC
AGTGTCCTTGGCACATTTATGGACAAACACATTTCCTAGCATCTTTATGG
TTTATTGATATCCTGAATGTCCTCTTTCCCCTGAAGGACTCTAAAATCTT
GAACATTATCACTATCTGATACACACATATAAAGCCAGCTCAGAGGGTGT
AGGGACTTAGAGAAACTTAACCTAATCAGATCTCAAAGTTATAAACCAAA
AAAAAAAAAAAAATCAATAAAATATTTTGCACCAACTTCTAACCTCTACA
GAAATAAATGTGATGTATGCTGCAAAGACAAATAATTCCTTTACAGAAGA
GTTATTGAAGTTTTATACACTTTGATTTTTAGAAGTAGTTAAAACTATAT
ATCAAAGGAATTGGCACGGAAGAAAAATTAAAGAAGAAAACCCCACTAAT
AAAAAAACTACCCCTAACCCTGGAAGGAAATTTTTAACCCCTTAGAAAAA
AATTTCTGGGTGGGCTTTTTGGAAAAAACCAAAGAAA

Query= MSMg01no135_c08.g1 MSMg01no135_c08.g1 CHROMAT_FILE:
MSMg01no135_c08.g1 PHD_FILE: MSMg01no135_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:12 2005
         (433 letters)



>mm_chr14_112930156_112930989
          Length = 834

 Score =  777 bits (402), Expect = 0.0
 Identities = 428/440 (97%), Gaps = 7/440 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaattctctttggaaaacttactttcttactttctgtctaaggctactaactctttact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaattctctttggaaaacttactttcttactttctgtctaaggctactaactctttact 260

                                                                       
Query: 61  gcataagactcccaaaataatctgcatcacatctttctttctttctatttctatctcagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcataagactcccaaaataatctgcatcacatctttctttctttctatttctatctcagc 320

                                                                       
Query: 121 tatatatctcccacaaaaacaacaacacactccaatctaagttgggcatgtatttcagtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatatatctcccacaaaaacaacaacacactccaatctaagttgggcatgtatttcagtg 380

                                                                       
Query: 181 tccttggcacatttatggacaaacacatttcctagcatctttatggtttattgatatcct 240
           | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 ttcttggcacatttatggacaaacacattttctagcatctttatggtttattgatatcct 440

                                                                       
Query: 241 gaatgtcctctttcccctgaa-ggactctaaaatcttgaacattatcactatctgataca 299
           ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatgtcctctttcccccgaaaggactctaaaatcttgaacattatcactatctgataca 500

                                                                       
Query: 300 cacatataaagccagctcagagggtgtagggacttagagaaacttaacctaatcagatct 359
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 cacatataaagccagctcagagggtttagggacttagagaaacttaacctaatcagatct 560

                                                                       
Query: 360 caaagttataaaccaaaaaaaaaaaaaaaa------tcaataaaatattttgcaccaact 413
           ||||||||||||||||||||||||||||||      ||| ||||||||||||||||||||
Sbjct: 561 caaagttataaaccaaaaaaaaaaaaaaaaaaaaaatcagtaaaatattttgcaccaact 620

                               
Query: 414 tctaacctctacagaaataa 433
           ||||||||||||||||||||
Sbjct: 621 tctaacctctacagaaataa 640


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 834
Length adjustment: 9
Effective length of query: 424
Effective length of database: 825
Effective search space:   349800
Effective search space used:   349800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)