Query= MSMg01no137_h02.b1 MSMg01no137_h02.b1 CHROMAT_FILE:
MSMg01no137_h02.b1 PHD_FILE: MSMg01no137_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:08 2005
(405 letters)
>mm_chr14_52753791_52754594
Length = 804
Score = 774 bits (400), Expect = 0.0
Identities = 403/404 (99%), Gaps = 1/404 (0%)
Strand = Plus / Plus
Query: 1 cacatttctgaggactaaactcagggaccttgttcatgctaggcgagagctctatagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacatttctgaggactaaactcagggaccttgttcatgctaggcgagagctctatagtta 260
Query: 61 tatcctcagccccctaagaaactggtttttttgaaatgaggtctctctatgtagactagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatcctcagccccctaagaaactggtttttttgaaatgaggtctctctatgtagactagg 320
Query: 121 ctgtcctggaattcactatgtagttcaggatgatctcaaactcacccacctttgtctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtcctggaattcactatgtagttcaggatgatctcaaactcacccacctttgtctccc 380
Query: 181 agtgtgaggattggggttaaagtcatgtgccactgacacctgactgaaaaaaaatcttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgtgaggattggggttaaagtcatgtgccactgacacctgactgaaaaaaaatcttaa 440
Query: 241 taatttggtaactcaagtagtttttatatgacatttattcagaaacacttgtgggttttt 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taatttggtaac-caagtagtttttatatgacatttattcagaaacacttgtgggttttt 499
Query: 301 gttgttgttgctgttgctgttttgtttgcttgcttgtttgttttacagagaatttcctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gttgttgttgctgttgctgttttgtttgcttgcttgtttgttttacagagaatttcctct 559
Query: 361 gtgtaccccctgtcctagaactcggtctgtagaccaggctggcc 404
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtgtaccccctgtcctagaactcggtctgtagaccaggctggcc 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 804
Length adjustment: 9
Effective length of query: 396
Effective length of database: 795
Effective search space: 314820
Effective search space used: 314820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_h02.g1 MSMg01no137_h02.g1 CHROMAT_FILE:
MSMg01no137_h02.g1 PHD_FILE: MSMg01no137_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:08 2005
(636 letters)
>mm_chr14_52892130_52893164
Length = 1035
Score = 832 bits (430), Expect = 0.0
Identities = 433/434 (99%), Gaps = 1/434 (0%)
Strand = Plus / Minus
Query: 1 aaggctggcctgagcttcatctcgaggctacagaattacacaaaatgaaaccaaacaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aaggctggcctgagcttcatctcgaggctacagaattacacaaaatgaaaccaaacaaga 374
Query: 61 aaactccatgttagctatttgctgctttagacatttttttttttttttttagctgaccaa 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 373 aaactccatgttagctatttgctgctttagaca-ttttttttttttttttagctgaccaa 315
Query: 121 ggacaaggatgcttgagattgatacgaccccacttaagttgaactagacagtttttccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ggacaaggatgcttgagattgatacgaccccacttaagttgaactagacagtttttccag 255
Query: 181 ccagcacactggctccaaagtgctcatgaacattgctgacaggaaaacgtagggtgcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ccagcacactggctccaaagtgctcatgaacattgctgacaggaaaacgtagggtgcttt 195
Query: 241 taaacaaaatctcagtgttgtgcttttaccatcgaagagctcagggtgaaaacctgctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 taaacaaaatctcagtgttgtgcttttaccatcgaagagctcagggtgaaaacctgctta 135
Query: 301 gatcagagaggcaggggaaacgtccaggtgaccttctcctcagcccagggccctctgtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gatcagagaggcaggggaaacgtccaggtgaccttctcctcagcccagggccctctgtca 75
Query: 361 aaaaactttcttcaaactgaatgtccctcctttccacttcctgtgcatcttgctctttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 aaaaactttcttcaaactgaatgtccctcctttccacttcctgtgcatcttgctctttgt 15
Query: 421 ccccgactccctct 434
||||||||||||||
Sbjct: 14 ccccgactccctct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1035
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1025
Effective search space: 641650
Effective search space used: 641650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
