Query= MSMg01no137_n13.b1 MSMg01no137_n13.b1 CHROMAT_FILE:
MSMg01no137_n13.b1 PHD_FILE: MSMg01no137_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:41 2005
(618 letters)
>mm_chr14_111851775_111852792
Length = 1018
Score = 1050 bits (543), Expect = 0.0
Identities = 591/607 (97%), Gaps = 1/607 (0%)
Strand = Plus / Minus
Query: 4 ggaattcactttgttg-ccaggctggcctcgaactcagaaatctgcctgcctctgcctcc 62
|||| ||||||||| | ||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 607 ggaactcactttgtagaccaggctggcctcaaactcagaaatctgcctgcctgtgcctcc 548
Query: 63 cgagtgctgggattaaagaagtgtgccaccaagcatggcgagcatatacacaaacataca 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 547 cgagtgctgggattaaagaagtgtgccaccaagcatggcgagcatatacacaaacataaa 488
Query: 123 agaaacacacaagcacaggcatacgtctacacacagagatctgttatagatggaggttag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 agaaacacacaagcacaggcatacgtctacacacagagatctgttatagatggaggttag 428
Query: 183 gatgtatttatacattgtttcttcttttatagttatttctcctgtcccttccaaaaatgt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gatgtatttatacattgtttcttcttttatagttatttctcctgtcccttccaaaaatgt 368
Query: 243 cccctttaaacactgcttttgagagtgtaaaaaggagcttactgatagaaaataaatgta 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cccctttaaacactgcttttgagagtgtaaaaaggagcttactgatagaaaataaatgta 308
Query: 303 ggcagctgtttcaggatatttggtcacattgtgaatccttaaactgtattattttttttt 362
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 307 ggcagctgtttcaggatatttggtcacattgtgaatccttaagctgtattattatttttt 248
Query: 363 aataatctgttcctaatttgctatggctcagcattaacacagacatctaatccatgagct 422
||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 247 aataatctgtttctaattttctatggctcagcattaacacagacatctaatccatgagtt 188
Query: 423 ttctgtgtattgcaaatgggattaaataaagtcaaccatagggctggaaacaaaaagcaa 482
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 187 ttctgtgtattgcaaatgtgattaaataaagtcaaccatagggcaggaaacaaaaagcaa 128
Query: 483 ccagttgacagggagtaaacataggaaaaataaacatagcaaaaggaagtcaggaggaca 542
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 127 ccagttgacagggagtaaacacaggaaaaataaacatagtaaaaggaagtcaggaggaca 68
Query: 543 aaagggaggcacatagcaagttgaagggagggaagttcagtttgagaggtttttgagatg 602
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 67 aaagggaggcacatagcaagttgaagggagggaagttcagtttgaggggtttttgagatg 8
Query: 603 gcatgga 609
|||||||
Sbjct: 7 gcatgga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_n13.g1 MSMg01no137_n13.g1 CHROMAT_FILE:
MSMg01no137_n13.g1 PHD_FILE: MSMg01no137_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:41 2005
(651 letters)
>mm_chr14_111705182_111706232
Length = 1051
Score = 1191 bits (616), Expect = 0.0
Identities = 643/652 (98%), Gaps = 1/652 (0%)
Strand = Plus / Plus
Query: 1 aatgaacagtacaaatcaaatgagaatattatgtgcttttcattataattattttatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 aatgaacagtacaaatcaaatgagaatattatgtgcttttcattataattattttatagt 260
Query: 61 catcttgaagatcattcagctagtgggcccatttatctactacgagaatagtgtattgga 120
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 catcttgaagatcatccagctagtgggcccatttatctactatgagaatagtgtattgga 320
Query: 121 atacaatattctgaattagaaaacatagaatgattcatgagtaagtgctgggaatatatc 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 atacaatattctgaattagaaaacatagaatgattcatgaataagtgctgggaatatatc 380
Query: 181 tacaaataggagaggagtagttattaaaatataataaattctatttagagcatatgttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacaaataggagaggagtagttattaaaatataataaattctatttagagcatatgttta 440
Query: 241 gagcacatgtatgcatgtgttctcagggctgaacatttagcattgtgtaaccaactggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagcacatgtatgcatgtgttctcagggctgaacatttagcattgtgtaaccaactggtg 500
Query: 301 ccctcttccatgggaaaatctatctcttatgctctcagcattccttagatttccatggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccctcttccatgggaaaatctatctcttatgctctcagcattccttagatttccatggtt 560
Query: 361 cttagtctaaatatgaggccatcttatcttctcccagtcccattagaatatctcttgttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttagtctaaatatgaggccatcttatcttctcccagtcccattagaatatctcttgttg 620
Query: 421 tctttttcctgctcagatttagaaagtcataatggtaagaacttataaggatggattcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctttttcctgctcagatttagaaagtcataatggtaagaacttataaggatggattcta 680
Query: 481 acattactagaaaatacaatctcacaaacacttcctattcctccattttttacatttttt 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 681 acattactagaaaatacaatctcacaaacacttcctattcctccgttttttacatttttt 740
Query: 541 tt-ctgctctcagttctgcaataatccctgagcattatatacagactttatatggcagat 599
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttctgccctcagttctgcaataatccctgagcattatatacagactttatatggcagat 800
Query: 600 gtgtctaattggaatggtctccacaactatatgattcaatcagttaaagttt 651
|||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 801 gtgtctaattggaatggtctccacaactatataattcaatcagttgaagttt 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
