Query= MSMg01no137_o05.b1 MSMg01no137_o05.b1 CHROMAT_FILE:
MSMg01no137_o05.b1 PHD_FILE: MSMg01no137_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:44 2005
(374 letters)
>mm_chr14_22020323_22021096
Length = 774
Score = 677 bits (350), Expect = 0.0
Identities = 365/370 (98%)
Strand = Plus / Minus
Query: 5 gaattctcaaagcatctcttaagaaaatgcagcaaagcaaatacaaatagaagcacagaa 64
|||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 574 gaattctcaaagcaacttttaagaaaatgcagcaaaacaaatacaaatagaagcacagaa 515
Query: 65 ctgttatttatgaggaggagcttatgagtggcaatgcacaatgaatgggatacccacacc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ctgttatttatgaggaggagcttatgagtggcaatgcacaatgaatgggatacccacacc 455
Query: 125 tattagaacacttgaacagtacactaccaagtacatcatcattgggaacagaaatgtaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tattagaacacttgaacagtacactaccaagtacatcatcattgggaacagaaatgtaaa 395
Query: 185 actaaaatctaaatgtgtaggaaacctaagtcattacgtcacctatacatccatcacagt 244
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 394 actaaaatctaaatgtgtaggaaacctaagtcattacgtcacccatacatccatcacagt 335
Query: 245 gcatcaaggaaaataacttcaattctgcataatgtcatagcgacatacgataagtatgag 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 334 gcatcaaggaaaataacttcaattctgcataatgccatagcgacatacgataagtatgag 275
Query: 305 tcacactgtatttacatatttactctgaatatgtgacattgtgttggctaatttttatgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tcacactgtatttacatatttactctgaatatgtgacattgtgttggctaatttttatgt 215
Query: 365 cagcattacc 374
||||||||||
Sbjct: 214 cagcattacc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_o05.g1 MSMg01no137_o05.g1 CHROMAT_FILE:
MSMg01no137_o05.g1 PHD_FILE: MSMg01no137_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:44 2005
(323 letters)
>mm_chr14_21882818_21883540
Length = 723
Score = 335 bits (173), Expect = 3e-96
Identities = 203/217 (93%), Gaps = 12/217 (5%)
Strand = Plus / Plus
Query: 14 ttct-ggaattcctggtttgttttgaaactaatgagctgttgactgcatttgtccataga 72
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ttctaggaattcctggtttgttttgaaactaatgagctgttgactgcatttgtccataga 273
Query: 73 gaaaattccctccacatatacctgcatcccttatatagacagtaactttattaaggccca 132
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 g-aaattccctccacatatacctgcatcccttatatagacagtaactttattaaggccca 332
Query: 133 gtggttattgttttctttgtttcttccttccttcctttcttccttcctt-cctttctttc 191
||||||||||||||||||||||||| | |||||||||||||| |||| |||||
Sbjct: 333 gtggttattgttttctttgtttctt--tg------tttcttccttcctttcctt-ctttc 383
Query: 192 tttctttctttctttctttctttctttctttctttct 228
|||| ||||||||||||||||||||||||||||||||
Sbjct: 384 tttccttctttctttctttctttctttctttctttct 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
