Query= MSMg01no139_e03.b1 MSMg01no139_e03.b1 CHROMAT_FILE:
MSMg01no139_e03.b1 PHD_FILE: MSMg01no139_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:35 2005
(649 letters)
>mm_chr14_73924665_73925718
Length = 1054
Score = 1230 bits (636), Expect = 0.0
Identities = 645/650 (99%), Gaps = 5/650 (0%)
Strand = Plus / Plus
Query: 5 gaattccaaatggcccccaggaagctggaaactgccggctccaaacgatcctttcctttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaaatggcccccaggaagctggaaactgccggctccaaacgatcctttcctttt 264
Query: 65 ccccagaaggacgcagcgaggatgctcgcagctcagcaccaccacgccgaccccaactcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccccagaaggacgcagcgaggatgctcgcagctcagcaccaccacgccgaccccaactcc 324
Query: 125 tggccgccgcctcggctctgcgttagcggccatagcatttggctgaccccggaagtgacg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggccgccgcctcggctctgcgttagcggccatagcatttggctgaccccggaagtgacg 384
Query: 185 ttgaagctgtacgggaaccggcaggagcctcgctgattgctcgctgagtgttgtgtctca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgaagctgtacgggaaccggcaggagcctcgctgattgctcgctgagtgttgtgtctca 444
Query: 245 cgaatcacctgtcgcctg---ca--gatcatgcagaaacaaccatataaataactaacat 299
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 445 cgaatcacctgtcgcctggtgcatagatcatgcagaaacaaccatataaataactaacat 504
Query: 300 aagagtactgaaagatgatttggggaagtaaatgagactaattaagtttctttaggataa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagagtactgaaagatgatttggggaagtaaatgagactaattaagtttctttaggataa 564
Query: 360 attcatattttagagaaaaacaaattatagtagataaaaatatacatcaactaaaactga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attcatattttagagaaaaacaaattatagtagataaaaatatacatcaactaaaactga 624
Query: 420 aatatgaaaagaaaaacttggggaaatcagctgtaacaagattgacatcttaaatctttg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatatgaaaagaaaaacttggggaaatcagctgtaacaagattgacatcttaaatctttg 684
Query: 480 gacgggtgggtttactttaaaagtattactttatttctactaatgtgtgcataattttag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gacgggtgggtttactttaaaagtattactttatttctactaatgtgtgcataattttag 744
Query: 540 aaacccaatagtacaaaactgcccaaggacagacactatcccttttagccctgcttccag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaacccaatagtacaaaactgcccaaggacagacactatcccttttagccctgcttccag 804
Query: 600 agacagctttaactctttgaaatgttagtttttatatttccacacatata 649
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agacagctttaactctttgaaatgttagtttttatatttccacacatata 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1054
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1044
Effective search space: 667116
Effective search space used: 667116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_e03.g1 MSMg01no139_e03.g1 CHROMAT_FILE:
MSMg01no139_e03.g1 PHD_FILE: MSMg01no139_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:36 2005
(617 letters)
>mm_chr14_74083400_74084416
Length = 1017
Score = 1093 bits (565), Expect = 0.0
Identities = 604/617 (97%)
Strand = Plus / Minus
Query: 1 agacatcttgacaagagttgagaaatggcaaccagaatggatttgctagcccgttgaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 817 agacatcttgacaagagttgagaaatggcaaccagaatggatttgctagcctattgaagg 758
Query: 61 ggatctgattaaaaatagaaacaaatttctagactcccaaatatgagttccagatatgcc 120
|||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 757 ggatctgatttaaaacagaaacaaattcctagactcccaaatatgagttccagatacgcc 698
Query: 121 acaaaagagcaaaaatggcagcctcttttctccctcagaatccccagttggtggtattgg 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 697 ataaaagagcaaaaatggcagcctcttttctccctcagaatccccagttggtggtatcgg 638
Query: 181 gccatttatcttttaaatctaaggcttgaaataactcccacacatgtataagtacagggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gccatttatcttttaaatctaaggcttgaaataactcccacacatgtataagtacagggc 578
Query: 241 tgatattggtgtttctgtaatccataagatatggatggctgtatgaactcagaatcctaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tgatattggtgtttctgtaatccataagatatggatggctgtatgaactcagaatcctaa 518
Query: 301 aagaaatagcattaatgattagcatcagtgatattaatgaagtctctatgttggggtgaa 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 517 aagaaatagcattaatgattagcatcagtgatattaatgaagtctccatgttggggtgaa 458
Query: 361 tatcatgattgcctgggtctaacaggagcccaggctcctcatcagtcaactgcaagatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tatcatgattgcctgggtctaacaggagcccaggctcctcatcagtcaactgcaagatga 398
Query: 421 cagtcattatatccaccataaaccgctcccatcacaatggctatggtggggagcaggagc 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cagtcattatatccaccagaaaccgctcccatcacaatggctatggtggggagcaggagc 338
Query: 481 cctgatcaggcttcaaacaaaaccatgccagcgagcatcacagaattctatttttactct 540
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 337 cctgatcaggcttcaaacaaaaccatgccagcaagcatcacaggattctatttttactct 278
Query: 541 ttcactttgctgctatcaacgaaagcatgtatcttgacttttgttagaaaaaaataaaaa 600
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 277 ttcactttgctgctatcaacgaaagcatgtatcttgacttttgttggaaaaaaataaaaa 218
Query: 601 gggggaccccagggacc 617
|||||||||||||||||
Sbjct: 217 gggggaccccagggacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
