Query= MSMg01no145_o05.b1 MSMg01no145_o05.b1 CHROMAT_FILE:
MSMg01no145_o05.b1 PHD_FILE: MSMg01no145_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:06 2005
(373 letters)
>mm_chr14_70430975_70431742
Length = 768
Score = 663 bits (343), Expect = 0.0
Identities = 361/369 (97%), Gaps = 5/369 (1%)
Strand = Plus / Plus
Query: 5 gaattctgggatcctctcgccctctactgacccaatttatctacaggtcacctggaagca 64
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgggatcctct-gccctctgctgacccaatttatctacaggtcacctggaagca 263
Query: 65 gggttaggccagtgcctgcatggtcacattgagagaggctgctgactgagtcagaaatga 124
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 264 gggttaggccagtgcctgcatggtcacattgag----gctgctgactgagtcagaaatga 319
Query: 125 cccttgttgcttgctttagactctgccatggtggcctatagacctcttccagactgtgac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cccttgttgcttgctttagactctgccatggtggcctatagacctcttccagactgtgac 379
Query: 185 cagaagacctcagttaggcagttccggagtcttctttccatcctcagaggctatgggggc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cagaagacctcagttaggcagttccggagtcttctttccatcctcagaggctatgggggc 439
Query: 245 tttgatgatatctatcttatctccctcgggagctatggcttgccaagatcccctgtgcac 304
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 440 tttgatgatatctatcttatctccctcgggagctatggcttgctaagatcccctgtgcac 499
Query: 305 ctctaggtatttatctgcagtaagtgggagggatggcttcccacttcatggtatattctg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 500 ctctaggtatttatctgcagtaagtgggagggatggcttcccacttcatggtatattttg 559
Query: 365 ggagatttt 373
|||||||||
Sbjct: 560 ggagatttt 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 768
Length adjustment: 9
Effective length of query: 364
Effective length of database: 759
Effective search space: 276276
Effective search space used: 276276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_o05.g1 MSMg01no145_o05.g1 CHROMAT_FILE:
MSMg01no145_o05.g1 PHD_FILE: MSMg01no145_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:06 2005
(227 letters)
>mm_chr14_70569545_70570171
Length = 627
Score = 387 bits (200), Expect = e-112
Identities = 221/228 (96%), Gaps = 1/228 (0%)
Strand = Plus / Minus
Query: 1 tacgttgttggcctagcagatggtgggtactcaagggcatgtcttcctgtagtggcccat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 314 tacgttgttggcctagcagatggtgggtactcaagggcatgtcttcctgtagtgtcccat 255
Query: 61 ctgagcaaacagcagcagcccctgagaacgtctatgggaaaattcggattcctagggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ctgagcaaacagcagcagcccctgagaacgtctatgggaaaattcggattcctagggaat 195
Query: 121 ttattataaacacagatctccggggccccaggctggacttgctgcaaagtgggaattggg 180
||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||
Sbjct: 194 ttattataaacacagatctccggggccccagcctggacttgctgcagagtaggaattggg 135
Query: 181 gactcaagaacaggaacttgtggg-ttttgtttttgtttttgtttttg 227
|||||||||||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 134 gactcaagaacaggaacttgtggggttttttttttttttttgtttttg 87
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 627
Length adjustment: 9
Effective length of query: 218
Effective length of database: 618
Effective search space: 134724
Effective search space used: 134724
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
