Query= MSMg01no146_h20.b1 MSMg01no146_h20.b1 CHROMAT_FILE:
MSMg01no146_h20.b1 PHD_FILE: MSMg01no146_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:19 2005
(491 letters)
>mm_chr14_84411844_84412734
Length = 891
Score = 168 bits (87), Expect = 6e-46
Identities = 102/111 (91%), Gaps = 8/111 (7%)
Strand = Plus / Minus
Query: 1 aacagtttgaaaatattagtgtgcccttttcattaaatga----cccctttctttaaagt 56
||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 307 aacagtttgaaaatattagtgtgaccttttcattaaatgataat----tttctttaaagt 252
Query: 57 aaaagtatatttcaaacacatttcaccatttcctgaatattctctttttct 107
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aaaagtatatttcaaacacatttcaccatttcctgaatattctctttttct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no146_h20.g1 MSMg01no146_h20.g1 CHROMAT_FILE:
MSMg01no146_h20.g1 PHD_FILE: MSMg01no146_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:19 2005
(625 letters)
>mm_chr14_84280800_84281824
Length = 1025
Score = 1116 bits (577), Expect = 0.0
Identities = 613/625 (98%)
Strand = Plus / Plus
Query: 1 attcttgatatacgccttttagaacagtacataacaaattgtaggtgcttaaacactttt 60
|||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 attcttgatatatggcttttagaacagtacataacaaattttaggtgcttaaacactttt 260
Query: 61 gaatacagagatggtaagcataagtaaaaattagaatgtaggttttgaacacagtctcat 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 gaatacagagatggtaagcataagtaaaaattagaatgtaggatttgaacacagtctcat 320
Query: 121 gtatctgagactagttctacacctgatatagctgtgatgtaggtgtgactgccctatgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtatctgagactagttctacacctgatatagctgtgatgtaggtgtgactgccctatgcc 380
Query: 181 actgagtcacacccagcaattggagaaagatttttattgaaagttgtaaaagtagcaaaa 240
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgagtcacacccagaaattagagaaagatttttattgaaagttgtaaaagtagcaaaa 440
Query: 241 ataagactccaataacactcaagatgttcttacgtaaatctgattacaatagaaatcctt 300
||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 441 ataagactccaataacactcaagatattcttacgtaaatctgaagacaatagaaatcctt 500
Query: 301 ccttttgaggtttttgattcaacctcctcataaaatgaagagtagccctgaaaagtggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccttttgaggtttttgattcaacctcctcataaaatgaagagtagccctgaaaagtggga 560
Query: 361 aagaacaaagcttcccagagaacttcatccaggctttctattttaacttttgttgatcat 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 aagaacaaagcttcccagagaacttcatccaggctttctattttaacgtttgttgatcat 620
Query: 421 tcgtcagtacagttcttagacaacatcaaaatgttccattcaattacttgcaacttcact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcgtcagtacagttcttagacaacatcaaaatgttccattcaattacttgcaacttcact 680
Query: 481 ggagtctatcgtcttaagttcagtcctgaatacattttctagcttacattataagtaacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggagtctatcgtcttaagttcagtcctgaatacattttctagcttacattataagtaacc 740
Query: 541 atgagacttcttatacaattctcaaaaataattataaaacaaaacaactgttatcattgt 600
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 741 atgagacttcttatacaattctcaaaaataattataaaataaaacagctgttatcattgt 800
Query: 601 ctcagaaaatatgactatttcgtgt 625
|||||||||||||||||||||||||
Sbjct: 801 ctcagaaaatatgactatttcgtgt 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
