Query= MSMg01no147_g12.b1 MSMg01no147_g12.b1 CHROMAT_FILE:
MSMg01no147_g12.b1 PHD_FILE: MSMg01no147_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:59 2005
(594 letters)
>mm_chr14_86224349_86225342
Length = 994
Score = 1071 bits (554), Expect = 0.0
Identities = 577/592 (97%), Gaps = 12/592 (2%)
Strand = Plus / Plus
Query: 3 gaattcctcaatgggtttagaaataattctaataaactccttctcccacttgctacagca 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcctcaatgggtttagaaataattctaataaactccttctcccacttgctacagca 262
Query: 63 agtatttaaaatccataattctcaaaatctatgccactgtcctaaccagtgacctaattc 122
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agtatttaatatccataattctcaaaatctatgccactgtcctaaccagtgacctaattc 322
Query: 123 acacacacacacacacacacacacacacacacacacacacacacacacatacacacacac 182
||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 323 acacacacacacacacacacacacacacacacacaca------------tacacacacac 370
Query: 183 acacactctaagaaaaaatactttggtatatgtaagcatactttaagatttcctcctttt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 acacactctaagaaaaaatactttggtatatgtaagcatactttaagatttcctcctttt 430
Query: 243 tgaaaaaaaagctagattcatttttatttatgtttttaattttttatgtatatacataac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tgaaaaaaaagctagattcatttttatttatgtttttaattttttatgtatatacataac 490
Query: 303 tctctccatatgcttgccaaatgaaggtctcagatcctaatatagatggttttgagtcac 362
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tctctacatatgcttgccaaatgaaggtctcagatcctaatatagatggttttgagtcac 550
Query: 363 atggcgagaactgaactcagcaactatgaaagaggagcagacagtactcttaactgctaa 422
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 atggtgagaactgaactcagcaactatgaaagaggagcagacagtactcttaactgctaa 610
Query: 423 gctatctctccagctcaggtatcctgctttcatacttatatctaggtcatgttttgtcat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gctatctctccagctcaggtatcctgctttcatacttatatctaggtcatgttttgtcat 670
Query: 483 aatggaacatatatgcacagagcacacaggattccaaatttaatttgaagttatgaaaac 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aatggaacatatatgcacagagcacacaggattccaaatttaatttgaagttatgaaaac 730
Query: 543 aagcatgcacatatctatgtttaaaatctaattgtagcatttgcaatatact 594
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 aagcatgcacatatctatgtttaaaatctaattgtagcatttgcaatatact 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_g12.g1 MSMg01no147_g12.g1 CHROMAT_FILE:
MSMg01no147_g12.g1 PHD_FILE: MSMg01no147_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:59 2005
(636 letters)
>mm_chr14_86306159_86307198
Length = 1040
Score = 1180 bits (610), Expect = 0.0
Identities = 631/640 (98%), Gaps = 4/640 (0%)
Strand = Plus / Minus
Query: 1 tcaatgaccaaaaaaggaacaatcatgaataatgctattaatattccacaggac----tt 56
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 840 tcaatgaccaaaaaaggaacaatcatgaataatgctattaatattccacaggactttttt 781
Query: 57 ttttttttcatcataagtgtggtctccaagggatgtgccaataggcagcttctatatgtt 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ttttttttcatcataagtgtggtctccaagggatgtgccaataggcagcttctatatgtt 721
Query: 117 agctctatgattttgataatgccctcttattttctacaattcacacagtttataaatctt 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 agctctatgattttgataatgccctcttattttctacaattcacacagtttataaatctt 661
Query: 177 tattaaagggcaagactcaagcacagggcattggctactgagttgcaatttagcaatcac 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tattaaagggcaagactcaagcacagggcattggctactgagttgcaatttagcaatcac 601
Query: 237 ataacaatgaaagttgatggaaatgtaaaactagtcatttttttggaaccacattatttg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ataacaatgaaagttgatggaaatgtaaaactagtcatttttttggaaccacattatttg 541
Query: 297 agctgaaattgcattgtgagaatgtgtaaaactagaattagattaaaattattaatattt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 agctgaaattgcattgtgagaatgtgtaaaactagaattagattaaaattattaatattt 481
Query: 357 gctgtaggttttactctacttcctttactattaggctaggatatgtaaggattttttgat 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 480 gctgtaggttttactctacttcctttactattaggctaggatatgtaaggatttttttat 421
Query: 417 ttgactattgggcaaatgtttatggagtaccttgtgaggacaatgccacctttaggggta 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttgactattgggcaaatgtttatggagtaccttgtgaggacaatgccacctttaggggta 361
Query: 477 ctgaaggattcaaagattagtactgttccaaagaacagcaataaaaacaaatctattaaa 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctgaaggattcaaagattagtactgttccaaagaacagcaataaaaacaaatctattaaa 301
Query: 537 aataaaaatgggaagataagatgtaggaatcaaagttttctgtttcttaacagagccaga 596
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 300 aataaaaatgggaagataagatgtaggaatcaaagttttctgtttcttaacagagctaga 241
Query: 597 gaggactagcaggttggctcagttcaatagggattgtgtt 636
||||||||||| ||| |||||||||||||||||| |||||
Sbjct: 240 gaggactagcaagtttgctcagttcaatagggatcgtgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1040
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1030
Effective search space: 644780
Effective search space used: 644780
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
