Query= MSMg01no147_h12.b1 MSMg01no147_h12.b1 CHROMAT_FILE:
MSMg01no147_h12.b1 PHD_FILE: MSMg01no147_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:04 2005
(643 letters)
>mm_chr14_96336419_96337462
Length = 1044
Score = 692 bits (358), Expect = 0.0
Identities = 364/366 (99%), Gaps = 1/366 (0%)
Strand = Plus / Minus
Query: 279 atagaagagaaactgcctagtcgtaccgcaacatgacattccaacttgatatggctgact 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 atagaagagaaactgcctagtcgtaccgcaacatgacattccaacttgatatggctgact 985
Query: 339 gatatccatgcgagggctacccttgtctgaatacaaatggagaagtagatgcagtagggg 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 gatatccatgcgagggctacccttgtctgaatacaaatggagaagtagatgcagtagggg 925
Query: 399 agaagaaaaaaaggaggaaggacttgcaggaaaagagggagaggaaactgccaacagaat 458
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 agaggaaaaaaaggaggaaggacttgcaggaaaagagggagaggaaactgccaacagaat 865
Query: 459 gtaagggaaataaatagatatgtcattaccagttttctcttttccttttctttattctac 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 gtaagggaaataaatagatatgtcattaccagttttctcttttccttttctttattctac 805
Query: 519 tagtggtcgttttattgataatttctgta-ttttttttgagataatcaggaaatgtattg 577
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 804 tagtggtcgttttattgataatttctgtacttttttttgagataatcaggaaatgtattg 745
Query: 578 tttttgtaaatttaatgtggtgtataacactgatagccttgccgtgggttttgttgttgt 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tttttgtaaatttaatgtggtgtataacactgatagccttgccgtgggttttgttgttgt 685
Query: 638 tgttgt 643
||||||
Sbjct: 684 tgttgt 679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1044
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1034
Effective search space: 654522
Effective search space used: 654522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_h12.g1 MSMg01no147_h12.g1 CHROMAT_FILE:
MSMg01no147_h12.g1 PHD_FILE: MSMg01no147_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:04 2005
(616 letters)
>mm_chr14_96190610_96191622
Length = 1013
Score = 1143 bits (591), Expect = 0.0
Identities = 605/611 (99%), Gaps = 3/611 (0%)
Strand = Plus / Plus
Query: 5 caatagctatacaaatgcataaacacattcataatcagtagctgaacttggatcttggaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 caatagctatacaaatgcataaacacattcataatcagtagctgaacttggatcttggaa 264
Query: 65 tactgaagaccttcaccaatgattcttaattatatttctcctgttttcaaagagttttct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tactgaagaccttcaccaatgattcttaattatatttctcctgttttcaaagagttttct 324
Query: 125 acagttgtcaatgaaagagcatggagggaataacacaattgtttcaaagaagggaattaa 184
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 325 acagttgtcaatgaaagagcatggagggaaaaacacaattgtttcaaagaagggaattaa 384
Query: 185 aaaaaaacatgtatacaaggcatcatatttgtatttataatctataagaagtaatttttt 244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaaa---atgtatacaaggcatcatatttgtatttataatctataagaagtaatttttt 441
Query: 245 gtggcagaagttaggacccaaaatatatgaactaaaaaatctattggcagaatttttcca 304
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 442 gtggcagaagttaggacccaaaatatatgaactaaaaaatctattggtagaatttttcca 501
Query: 305 tcaaggaacaagatcaaaagggataaagagaaacaacatccagcttaattttatcattga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tcaaggaacaagatcaaaagggataaagagaaacaacatccagcttaattttatcattga 561
Query: 365 ctcaagaggagagtgtctacttttcactgtcatatctgtaatatccttattctgggcaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ctcaagaggagagtgtctacttttcactgtcatatctgtaatatccttattctgggcaaa 621
Query: 425 ttgacatggactctcactcatttatttacttatatttttatctactgctgtgcttctgga 484
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttgacatggactctctctcatttatttacttatatttttatctactgctgtgcttctgga 681
Query: 485 gttccaaagggaaactgaatggtgatttttcaatgttggcttagaatcctcctcatttcc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gttccaaagggaaactgaatggtgatttttcaatgttggcttagaatcctcctcatttcc 741
Query: 545 ttttgagtctcagaaataggtcttaggtgttctttcatttcttggaaatgagaaaatatt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ttttgagtctcagaaataggtcttaggtgttctttcatttcttggaaatgagaaaatatt 801
Query: 605 ctcaaagtggt 615
|||||||||||
Sbjct: 802 ctcaaagtggt 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1013
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1003
Effective search space: 607818
Effective search space used: 607818
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
