Query= MSMg01no147_k07.b1 MSMg01no147_k07.b1 CHROMAT_FILE:
MSMg01no147_k07.b1 PHD_FILE: MSMg01no147_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:17 2005
(560 letters)
>mm_chr14_50205846_50206806
Length = 961
Score = 1069 bits (553), Expect = 0.0
Identities = 556/557 (99%), Gaps = 1/557 (0%)
Strand = Plus / Minus
Query: 5 gaattctc-aatcatccatcttttgccagctctctaatgaaagccctctaaacacttact 63
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 gaattctcaaatcatccatcttttgccagctctctaatgaaagccctctaaacacttact 702
Query: 64 cagttctcttgctcttctgtctaccaaagtcagatggtgcttttgtaggctctaagaaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 cagttctcttgctcttctgtctaccaaagtcagatggtgcttttgtaggctctaagaaaa 642
Query: 124 cccacaagataggggaacaggtaacaggagcgaggcggagaaagacatcacaggggaggt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 cccacaagataggggaacaggtaacaggagcgaggcggagaaagacatcacaggggaggt 582
Query: 184 ggtgagagcatgtgagtaacaggacagcaacttggccggcttttatatgtgcacacattt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ggtgagagcatgtgagtaacaggacagcaacttggccggcttttatatgtgcacacattt 522
Query: 244 caaaaactgagacggggatttgcactgctttgctggagctatgggttgtagaagacagga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 caaaaactgagacggggatttgcactgctttgctggagctatgggttgtagaagacagga 462
Query: 304 gagctctatttccaaaagccagggatgcttctgaataacctgccaagctaagtacaattc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gagctctatttccaaaagccagggatgcttctgaataacctgccaagctaagtacaattc 402
Query: 364 tggattaagagatcagccagggtcagttcacctgaccccgtgggtgcctggaggaatatg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tggattaagagatcagccagggtcagttcacctgaccccgtgggtgcctggaggaatatg 342
Query: 424 tgctagcagaacaaagttgctcaaaaaaacagctgatgtgaaggaccacctgtgagtgag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tgctagcagaacaaagttgctcaaaaaaacagctgatgtgaaggaccacctgtgagtgag 282
Query: 484 gcattaggctgagcatgggaaacatctatttctgtagggcaggatggtggatattgacaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gcattaggctgagcatgggaaacatctatttctgtagggcaggatggtggatattgacaa 222
Query: 544 taacatatgactcagca 560
|||||||||||||||||
Sbjct: 221 taacatatgactcagca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 961
Length adjustment: 10
Effective length of query: 550
Effective length of database: 951
Effective search space: 523050
Effective search space used: 523050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_k07.g1 MSMg01no147_k07.g1 CHROMAT_FILE:
MSMg01no147_k07.g1 PHD_FILE: MSMg01no147_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:17 2005
(547 letters)
>mm_chr14_50176438_50177384
Length = 947
Score = 1058 bits (547), Expect = 0.0
Identities = 547/547 (100%)
Strand = Plus / Plus
Query: 1 ctgtaggacccagtagcacatgtcgatgtttccttaaaaagagctcattaaatacatata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtaggacccagtagcacatgtcgatgtttccttaaaaagagctcattaaatacatata 260
Query: 61 ttgtttatcattgttgcctgtgttgtcatttggaagctcaagtaggaaaacctgcttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtttatcattgttgcctgtgttgtcatttggaagctcaagtaggaaaacctgcttcca 320
Query: 121 agctcacacaggtttttggcagaactaatttctagaattagagtggaactaatccccatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agctcacacaggtttttggcagaactaatttctagaattagagtggaactaatccccatg 380
Query: 181 gaattttattttgtttttcttttattttgtttttcatatcacaatgtaactcggaaaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaattttattttgtttttcttttattttgtttttcatatcacaatgtaactcggaaaagg 440
Query: 241 ggatcgcactccttctagatttgcggcttcttctagacaagaggaaaaacatggggagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggatcgcactccttctagatttgcggcttcttctagacaagaggaaaaacatggggagga 500
Query: 301 agaagctcacatatttcctcaccattctccttccccctcaccaagaatttgaggaggaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaagctcacatatttcctcaccattctccttccccctcaccaagaatttgaggaggaaa 560
Query: 361 aattgcaatttccaagtgtgtgctgctttatttgtacagctaaagtcaggagctcgcata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aattgcaatttccaagtgtgtgctgctttatttgtacagctaaagtcaggagctcgcata 620
Query: 421 taaggttatgtcctttagcagaattccttaagcatttggctacacaggagtagctaaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taaggttatgtcctttagcagaattccttaagcatttggctacacaggagtagctaaagg 680
Query: 481 aactagtcaaagcaggaaaaaggaaatatgcaaacaagactactgtttgcataagaatgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aactagtcaaagcaggaaaaaggaaatatgcaaacaagactactgtttgcataagaatgg 740
Query: 541 aagagtg 547
|||||||
Sbjct: 741 aagagtg 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
