CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGC
GGAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGAAAAAAA
TGTTCAACATCCTTAATCATCAGGGAGGATGTGGAGAAAGAGGAACACTC
CTCCATTGTTATTCTTCAGTAATTTCAGTAAACATGAAAAAAATTTAAAA
AAGTAAAACAGAAGAGTCCTGAGGTGAGGTAGAACTCTTAAGCAGGTAGA
ACATTATGGCAGACATGCATAATCTTGTAGAAAGATTGGAGAGGGCAGTG
GGCTCCCTGGAGGCAGTGTCATGTACCTCTGACATGCACTGTGGGTAAGG
AGACAGTCCGTCAAGAGGAGCAGTTCCATATGTGCAAGCATTTGACTTGC
TGCTTGCCAAGTCCATGGCAGAATACATGAAGGTGAGTAAGGAGGTTGGG
GGAGACATGCAGAAACGTGTGGAGAAGGTCCACATAAGCCTGAATTTGAA
GCGAGCTTTCCTGATTACGGCTTCTCAGTGGCAGCAGCCAGCCAGTAGTA
AACTTTCTGATTTGTTGATAACTTTCTCAGAGCTGATCCAAGAAGTTGTA
CCTTCTGGGAGAAGAGCCGAGACAGCAAAGTTTTCAATCATGTATCAGCT
GTCAGTGAAAGCATCCAGACCCTGGGCTGGGTGGCTCTGGCTGAGAAACC
TGGGCCTGTTATGAAAGAGATGAATGGTGTGGTCATGTTTTATATGAACC

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTTTCCGAATTCCTGATCTTTCCAAGACTTTTATCATG
AACAGGTGTTGGATTTTGTCAAAAGCTCTCAGCATCTAATGAGATGATCA
TATGGGATTTTTTTTCCTTTGAGTCTGTTTATATACTGGGTTACACTGAT
GGATTTCTGTACATTGAACCATCCCTGCATCCCTGGGATGAAGCCTACTT
GATCATGATGGATGATCCTTTTGATGTGTACTTGGATTCGGTTTGTGCAA
ATTTTATGAGTATTTTTGCATCGATATTCATAAGGAAAATTGGTCTGAAG
TTCTCTTGTTTTGTTGGATCTTTGTGTGGTTTAGGTATCAGAAGAAGTTA
GACTCCAGATAAACAAATTACCCTATGAAAAAATGGGGTACAGAGCTAAA
CAACGAATTCTCAACTGAGGAATAACGAATGGCTGAGAAGCACCTAAAAA
AATGTTCAACATCCTTAGTCATCAGGGAAATGCAAATCAAAACTACCCTG
AGATTCCACCTCACACCATTCAGAATGGCTAAGTTAAAAAATTCGATGAC
ATTACGTGCTGGCGAGGACGTGGATAAAGAGGAATACTCCTCCATTGCTG
GTGGGATTGCAAGCTAGTACAACCCCTCTGGAAATCAGTTCTGGCGGTTC
CTAATAAATTGATCATAGTACTACCTGAGGACCCACAATGCCAN

Query= MSMg01no147_l16.b1 MSMg01no147_l16.b1 CHROMAT_FILE:
MSMg01no147_l16.b1 PHD_FILE: MSMg01no147_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:23 2005
         (639 letters)



>mm_chr14_41108076_41109114
          Length = 1039

 Score = 1207 bits (624), Expect = 0.0
 Identities = 633/636 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaaatgttcaacat 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 ggaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaaatgttcaacat 890

                                                                       
Query: 64  ccttaatcatcagggaggatgtggagaaagaggaacactcctccattgttattcttcagt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 ccttaatcatcagggaggatgtggagaaagaggaacactcctccattgttattcttcagt 830

                                                                       
Query: 124 aatttcagtaaacatgaaaaaaatttaaaaaagtaaaacagaagagtcctgaggtgaggt 183
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 829 aatttcagtaaacatgaaaaaaatttaaaaaagcaaaacagaagagtcctgaggtgaggt 770

                                                                       
Query: 184 agaactcttaagcaggtagaacattatggcagacatgcataatcttgtagaaagattgga 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 agaactcttaagcaggtagaacattatggcagacatgcataatcttgtagaaagattgga 710

                                                                       
Query: 244 gagggcagtgggctccctggaggcagtgtcatgtacctctgacatgcactgtgggtaagg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gagggcagtgggctccctggaggcagtgtcatgtacctctgacatgcactgtgggtaagg 650

                                                                       
Query: 304 agacagtccgtcaagaggagcagttccatatgtgcaagcatttgacttgctgcttgccaa 363
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 agacagtctgtcaagaggagcagttccatatgtgcaagcatttgacttgctgcttgccaa 590

                                                                       
Query: 364 gtccatggcagaatacatgaaggtgagtaaggaggttgggggagacatgcagaaacgtgt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gtccatggcagaatacatgaaggtgagtaaggaggttgggggagacatgcagaaacgtgt 530

                                                                       
Query: 424 ggagaaggtccacataagcctgaatttgaagcgagctttcctgattacggcttctcagtg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ggagaaggtccacataagcctgaatttgaagcgagctttcctgattacggcttctcagtg 470

                                                                       
Query: 484 gcagcagccagccagtagtaaactttctgatttgttgataactttctcagagctgatcca 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gcagcagccagccagtagtaaactttctgatttgttgataactttctcagagctgatcca 410

                                                                       
Query: 544 agaagttgtaccttctgggagaagagccgagacagcaaagttttcaatcatgtatcagct 603
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 409 agaagttgtaccttctgggagaagagccgagacagcaaaattttcaatcatgtatcagct 350

                                               
Query: 604 gtcagtgaaagcatccagaccctgggctgggtggct 639
           ||||||||||||||||||||||||||||||||||||
Sbjct: 349 gtcagtgaaagcatccagaccctgggctgggtggct 314


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space:   647241
Effective search space used:   647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)