Query= MSMg01no148_c13.b1 MSMg01no148_c13.b1 CHROMAT_FILE:
MSMg01no148_c13.b1 PHD_FILE: MSMg01no148_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:58 2005
(569 letters)
>mm_chr14_81057998_81058966
Length = 969
Score = 969 bits (501), Expect = 0.0
Identities = 552/569 (97%), Gaps = 2/569 (0%)
Strand = Plus / Plus
Query: 1 agaataattaattcatacggatgccaaccccaaatccagggttctataggctcgtgcgtg 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 agaataattaattcatactgatgccaaccccaaatccagggttctataggctcctgcgtg 260
Query: 61 gtcaggatgacattttaaaagcagctcatgttggtgctttgtcagttaagtggattaagg 120
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcaggatgacattttaaaagctgttcatgttggtgctttgtcagttaagtggattaagg 320
Query: 121 cgataacgtatttctactccagattgtataccacttgtgtcaactttggctgctgaggag 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgataacgtatttctaccccagattgtataccacttgtgtcaactttggctgctgaggag 380
Query: 181 tggaaaggaagtattataatccttgaaaggacatgtctccaaaataaggctgtcaattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggaaaggaagtattataatccttgaaaggacatgtctccaaaataaggctgtcaattct 440
Query: 241 catgacaagttcccctaagacagagcttgagagaaaagcttaaggcatggcctccaatgc 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catgacaagttccccaaagacagagcttgagagaaaagcttaaggcatggcctccaatgc 500
Query: 301 aggaatgtcacatccagagcaggtacagagctttccattgcaagagcaccaacagagt-t 359
|| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 501 agaaatgtcacatccagagcaggtacagagctttccattgcaagagcattaagagagtat 560
Query: 360 aactggagcttacacatgtttttccacatagagaaaagttacatctgatcacctttaaat 419
| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 a-ctggcgcttacacatgtttttccacatagagaaaagttatatctgatcacctttaaat 619
Query: 420 gcttttcacatgcacacaagcatcgcaaattgatttttgtttaacccgattcatattaaa 479
||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 620 gcttttcacatgcacgcaagcatcgcaagttgatttttgtttaacctgattcatattaaa 679
Query: 480 gaagctccaaatgaagaggctgatggctacttggcgatctctctctcttggttcttggca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaagctccaaatgaagaggctgatggctacttggcgatctctctctcttggttcttggca 739
Query: 540 tagtgagatggataatgatgtatgtttcc 568
|||||||||||||||||||||||||||||
Sbjct: 740 tagtgagatggataatgatgtatgtttcc 768
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_c13.g1 MSMg01no148_c13.g1 CHROMAT_FILE:
MSMg01no148_c13.g1 PHD_FILE: MSMg01no148_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:58 2005
(563 letters)
>mm_chr14_81143807_81144769
Length = 963
Score = 659 bits (341), Expect = 0.0
Identities = 375/391 (95%), Gaps = 8/391 (2%)
Strand = Plus / Minus
Query: 181 gagctcaccattattgtaatagtttttttccataggtttatggctatcatacctatatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 gagctcaccattattgtaatagtttttttccataggtttatggctatcatacctatatta 904
Query: 241 cataaggctataatcttcctatgtgatcttcttgtcccatctatttgtcttatattttgt 300
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 903 cataaggctataatcttcctatgtgttcttcttgtcccatctatttgtcttatactttgt 844
Query: 301 ttacatgggataatgttccaatcacaacaaaatgtgtagatgacccatgtagcgggatta 360
||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||||
Sbjct: 843 ttacatgggataatgttccaatcgcaacaaaatgtgtagatgagtcatatagcgcgatta 784
Query: 361 aaatgcttctaa--------aatgcctctatttggtgtttacatttctgtcttttcaatg 412
||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 aaacgcttctaaaatgtcttaatgcctctatttggtgtttacatttctgtcttttcaatg 724
Query: 413 tcgtgaaaacaaggaaaactctaagccacatctttctttctttaactttagtttacttat 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 tcgtgaaaacaaggaaaactctaagccacatctttctttctttaactttagtttacttat 664
Query: 473 acattaaatgtttctttttattcatatcatgctgcccaatacttactagctgccataggt 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 acattaaatgtttctttttattcatatcatgctgcccaatacttactagctgccataggt 604
Query: 533 agtgttagtcttcgctggcaccaaaattttg 563
|||||||||||||||||||||||||||||||
Sbjct: 603 agtgttagtcttcgctggcaccaaaattttg 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
