Query= MSMg01no148_l02.b1 MSMg01no148_l02.b1 CHROMAT_FILE:
MSMg01no148_l02.b1 PHD_FILE: MSMg01no148_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:40 2005
(308 letters)
>mm_chr14_76219119_76219826
Length = 708
Score = 545 bits (282), Expect = e-159
Identities = 305/320 (95%), Gaps = 12/320 (3%)
Strand = Plus / Minus
Query: 1 aaacaaaccaaaatctgccccccctcccccgcagtctaagatttccttaactttcccaag 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 438 aaacaaaccaaaatctgccccccctcccccccagtctaagatttccttaactttcccaag 379
Query: 61 ctgtccatggagaaattttctgccctacctttttgactataggtgacattgacactgtca 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 378 ctgtccatggagaaattttctgccctacctttttgactataggtgatattgacactgtca 319
Query: 121 ctccccattcctgagaaggctcattgtctcagaggccaggaagaatttgaacactaggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctccccattcctgagaaggctcattgtctcagaggccaggaagaatttgaacactaggtc 259
Query: 181 atgctgtggttttctctggcaggtctgttattacgaggtcagacc------------ttt 228
||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 258 atgctgtggttttctctggcaggtctgttattacgaggtcagaccttttttttttttttt 199
Query: 229 ttttttttttctcagtcatatttctccaaggttgtccatgcgttgtcatccaaatataat 288
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 198 ttttttttttctcagtcatatttctccaaggctgtccatgcgttgtcatccaaatataat 139
Query: 289 atgggacaccttggctgtgc 308
||||||||||||||||||||
Sbjct: 138 atgggacaccttggctgtgc 119
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 708
Length adjustment: 9
Effective length of query: 299
Effective length of database: 699
Effective search space: 209001
Effective search space used: 209001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_l02.g1 MSMg01no148_l02.g1 CHROMAT_FILE:
MSMg01no148_l02.g1 PHD_FILE: MSMg01no148_l02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:40 2005
(265 letters)
>mm_chr14_76067931_76068596
Length = 666
Score = 447 bits (231), Expect = e-130
Identities = 253/261 (96%), Gaps = 3/261 (1%)
Strand = Plus / Plus
Query: 7 aattctttgttatgagattgttcagtacccacaggtcagaaac--tgtctcacatggcac 64
|||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 207 aattctttgttatgagattgttcagtacgcacaggtcagaaacagtgtctcacatggcac 266
Query: 65 agatttcactcacaaaactgcccagataaatccttgaaactagttctctcagaggctggc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agatttcactcacaaaactgcccagataaatccttgaaactagttctctcagaggctggc 326
Query: 125 aaacttgatgtgcaaagaatgctaaagagcacgaaatgactcctggtccatgggggagaa 184
||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 327 aaatttgatgtggaaagaatgctaaagagcac-aaatgactcctggtccatgggggagaa 385
Query: 185 ccagaaagactatttacagccccaagagactgtctatctatacatatggtgggtcataaa 244
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 386 ctagaaagactatttacagccccaagagactgtctatctagacatatggtgggtcataaa 445
Query: 245 caaaggagaccagaaatccta 265
|||||||||||||||||||||
Sbjct: 446 caaaggagaccagaaatccta 466
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 265
Length of database: 666
Length adjustment: 9
Effective length of query: 256
Effective length of database: 657
Effective search space: 168192
Effective search space used: 168192
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
