Query= MSMg01no148_p01.b1 MSMg01no148_p01.b1 CHROMAT_FILE:
MSMg01no148_p01.b1 PHD_FILE: MSMg01no148_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:00 2005
(628 letters)
>mm_chr14_117745188_117746215
Length = 1028
Score = 1191 bits (616), Expect = 0.0
Identities = 625/628 (99%)
Strand = Plus / Minus
Query: 1 attttaaatttactcagctagacaatgggagaccaaattaatctgtcatcacgctgtcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 attttaaatttactcagctagacaatgggagaccaaattaatctgtcatcacgctgtcct 769
Query: 61 ggctccctcatcctgacacattcgtagctttgaaggatatgctggcttcattgtaaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 ggctccctcatcctgacacattcgtagctttgaaggatatgctggcttcattgtaaaaca 709
Query: 121 ataactcagtaattgctcccacttgtgagatcctgtgaacaggctttaattgtcaacaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 ataactcagtaattgctcccacttgtgagatcctgtgaacaggctttaattgtcaacaca 649
Query: 181 cagagtgaaaattcaaagcaattttaatgactccaaatttgaattctgaagagatcttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 cagagtgaaaattcaaagcaattttaatgactccaaatttgaattctgaagagatcttac 589
Query: 241 agccactcatgtctagtaccgcctggatcctagagtttaacaataatttgagctggccgg 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 588 agccactcatgtctagtaccgcctggatcctagagtttaacaatgatttgagctggccgg 529
Query: 301 gttttagtgtcagttaaaggttattgacgagtcatgtggatgcattaatatggctaaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gttttagtgtcagttaaaggttattgacgagtcatgtggatgcattaatatggctaaatg 469
Query: 361 agcaaaatatgaagacatgtgaaatttgcgtcaactcttacaatttactaagaaataaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 agcaaaatatgaagacatgtgaaatttgcgtcaactcttacaatttactaagaaataaac 409
Query: 421 taacaaacaaacaagcgtcttcagtccttcagggtacagatgtgtctcctcagcaacact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 taacaaacaaacaagcgtcttcagtccttcagggtacagatgtgtctcctcagcaacact 349
Query: 481 ttccgctttccgttgttctcattccaccaactacatattgttcatgagaggtgattgacg 540
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 348 ttccgctttccgttgttctcattgcaccaactacatattgttcatgagaggtgattgacg 289
Query: 541 ttctaagctgctgcccatcgtctctgcccttggttccactgacttgggggtgcttcatgt 600
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 288 ttctaagctgctgcccatcgtccctgcccttggttccactgacttgggggtgcttcatgt 229
Query: 601 agacattcccttgataacagaatctttg 628
||||||||||||||||||||||||||||
Sbjct: 228 agacattcccttgataacagaatctttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_p01.g1 MSMg01no148_p01.g1 CHROMAT_FILE:
MSMg01no148_p01.g1 PHD_FILE: MSMg01no148_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:00 2005
(632 letters)
>mm_chr14_117587238_117588275
Length = 1038
Score = 1017 bits (526), Expect = 0.0
Identities = 609/640 (95%), Gaps = 10/640 (1%)
Strand = Plus / Plus
Query: 1 agagccttgaatgtttgtttctcagaagaaaaatagtagattgcgactagcttcatgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagccttgaatgtttgtttctcagaagaaaaatagtagattgcgactagcttcatgaaa 260
Query: 61 gggttcgtgtgtcttctacagagaagggaagtcattcaacaagtccaagccagacagttc 120
|| || ||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 261 ggtttggtgtgtcttctacagagtagggaagtcattcaacaagtccaagccagacacttc 320
Query: 121 tgacattttatcagttaatcttatatctcctttgttttaaataacaaatctcccttcctt 180
||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||
Sbjct: 321 tgacattttatcagttaatcttatatctcatttgttttaactaacaaatctccctccctt 380
Query: 181 tttaaaaaaagtgagttttaaaatgagttactgtaggtagggatctgttgtcaactcgtt 240
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttt-aaaagagtgagttttaaaatgagttactgtaggtagggatctgttgtcaactcgtt 439
Query: 241 agacaagggcatggatttttgacaagagtatatctgacatagttggtgaggaagtcttta 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 440 agacaagggcatggatttttgacaggagtatatctgacatagttggtgaggaagtcttta 499
Query: 301 gcaagaccctcctctattgcacttctatgagaatgtcataagagagaagctaagacattt 360
|||||||||| |||| |||||||||||||||| |||||||||||| ||||||||| ||||
Sbjct: 500 gcaagacccttctctgttgcacttctatgagactgtcataagagacaagctaagatattt 559
Query: 361 ttgtggcaatatgtcaatttcatgagacttttaaagggaatagaaatgtaatcttctaga 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttgtagcaatatgtcaatttcatgagacttttaaagggaatagaaatgtaatcttctaga 619
Query: 421 tgtcttcttccagagtttagtcttgaaaaaaa-atacat---tcatatg----ataattc 472
|||||||||||||||||||||||||||||||| ||| || | ||||| |||||||
Sbjct: 620 tgtcttcttccagagtttagtcttgaaaaaaatatatatgtat-atatgtatgataattc 678
Query: 473 cagcaataatttcttcctttccttcactctaattctgctatatgatcatatgacctatct 532
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||
Sbjct: 679 cagcaataatttcttcctttccttcactctaattctgttatatgattatatgacctacct 738
Query: 533 tattagaccataaaggtgatcctgctagtgaaccttcaaaagcaatgggacattcagaga 592
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 739 tattagaccataaaggtgatcctgctagtgaaccttcaaaagcaatgggacatgcagaga 798
Query: 593 aactttgggcatagtgcaagctagacaagtacctgtacca 632
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 799 aactttgggcatagtgcaagctagacaagtgcctgtacca 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1038
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1028
Effective search space: 639416
Effective search space used: 639416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
