Query= MSMg01no150_i11.b1 MSMg01no150_i11.b1 CHROMAT_FILE:
MSMg01no150_i11.b1 PHD_FILE: MSMg01no150_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:06 2005
(528 letters)
>mm_chr14_117107284_117108210
Length = 927
Score = 938 bits (485), Expect = 0.0
Identities = 515/525 (98%), Gaps = 1/525 (0%)
Strand = Plus / Minus
Query: 4 ggaattccaccttctttacctgcttcagcatattcaaaggcatttgtggatggcatgagg 63
|||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ggaattccactttcactacctgcttcagcatattcaaaggcatttgtggatggcatgagg 668
Query: 64 tacaggtccagcttcaggcttgttcctcacataggtaccaaaatatacaagcattattta 123
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tataggtccagcttcaggcttgttcctcacataggtaccaaaatatacaagcattattta 608
Query: 124 gcaaataatttgtttctttcctgcccctctccaaggatctaacacaaacaactaggctta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gcaaataatttgtttctttcctgcccctctccaaggatctaacacaaacaactaggctta 548
Query: 184 cttttaaactacccagtatatggacaccagatctaatattgatataaataacaaaatact 243
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 547 cttttaaactacccagtatatggacaccagatct-atattgatataaataacaaaatact 489
Query: 244 gtacttatggattaaattttctattctatgcttgtctgtttttcagattatcttgcctat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gtacttatggattaaattttctattctatgcttgtctgtttttcagattatcttgcctat 429
Query: 304 taatacatagccttttcttcaaatagaatttatctttcataacaattaaagtctttccac 363
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 428 taatacatagccttttcttcaaatagaatttatctttcataacaattaaattctttccac 369
Query: 364 aactctgctgccggtttggaaacagattaataatggagtaaatgctgtccttacatcgta 423
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aactctgctgctggtttggaaacagattaataatggagtaaatgctgtccttacatcgta 309
Query: 424 tcatctgactaggaggaatttgcattttaggctattaattctctgtaatttaaatttaag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tcatctgactaggaggaatttgcattttaggctattaattctctgtaatttaaatttaag 249
Query: 484 taccttttttctgtaagcataactagaatcttttaatataaacat 528
|| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 248 tattttttttctgtaagcataattagaatcttttaatataaacat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 927
Length adjustment: 10
Effective length of query: 518
Effective length of database: 917
Effective search space: 475006
Effective search space used: 475006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_i11.g1 MSMg01no150_i11.g1 CHROMAT_FILE:
MSMg01no150_i11.g1 PHD_FILE: MSMg01no150_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:06 2005
(462 letters)
>mm_chr14_116964603_116965464
Length = 862
Score = 849 bits (439), Expect = 0.0
Identities = 457/463 (98%), Gaps = 2/463 (0%)
Strand = Plus / Plus
Query: 1 atcacagcaaatagatcctttatattcttactgcctataatgagggtcattctacatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcacagcaaatagatcctttatattcttactgcctataatgagggtcattctacatttg 260
Query: 61 ttaaatatttctaattttaatttgtttttgtttgatattatttttgtttgattgattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaatatttctaattttaatttgtttttgtttgatattatttttgtttgattgattttc 320
Query: 121 ttagcattagaatgttgaactcatgaacactgagttcagtgttctaccactgaatgatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagcattagaatgttgaactcatgaacactgagttcagtgttctaccactgaatgatat 380
Query: 181 cgccagtcattcatatatatacatactcagtataattttcagactggtctggaacttgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgccagtcattcatatatatacatactcagtataattttcagactggtctggaacttgtg 440
Query: 241 taatattccaggatgccttattaacattcctcctgcctttgtctcccaggtgttgatgtt 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taatagtccaggatgccttattaacattcctcctgcctttgtctcccaggtgttgatgtt 500
Query: 301 taggcaaaactattaccacagccttctgacctgtgtccgcca-ctgtcctatatattagg 359
|||||||||||||||||||||||||||||||||||| | | |||||||||||||||||
Sbjct: 501 taggcaaaactattaccacagccttctgacctgtgtt-gtgaactgtcctatatattagg 559
Query: 360 tcagcaatgtggtcaaacctacttatatgccaataaattttcagcacttccttttagttt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcagcaatgtggtcaaacctacttatatgccaataaattttcagcacttccttttagttt 619
Query: 420 actttaaaatgctccagggctaactttaaattacattttatca 462
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 actttaaaatgctccagggctaactttaaattacattttatca 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|