Query= MSMg01no151_g20.b1 MSMg01no151_g20.b1 CHROMAT_FILE:
MSMg01no151_g20.b1 PHD_FILE: MSMg01no151_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:13 2005
(436 letters)
>mm_chr14_22068480_22069316
Length = 837
Score = 750 bits (388), Expect = 0.0
Identities = 424/436 (97%), Gaps = 3/436 (0%)
Strand = Plus / Minus
Query: 2 gaattctataaatgcacgaacatccactgaacagtgtatattaaatggtggacacaacag 61
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 636 gaattctataaatgcacaaacatccactgaactgtgtatattaaatggtggacacaacag 577
Query: 62 catggatatactgcaataaagctgttaaaattgattcaatcccacttgtctggtggacag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 catggatatactgcaataaagctgttaaaattgattcaatcccacttgtctggtggacag 517
Query: 122 atacaacacaagttattgattaaatcatattgaactataaaaattttataatatgatcag 181
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 516 atacaacacaagttattgattaaatcatactgaactataaaaattttataatatgatcag 457
Query: 182 taaatatggtgggataaagtctgtcaatattcagggcta-ttttttttgttcaatttcta 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 456 taaatatggtgggataaagtctgtcaatattcagggctatttttttttgttcaatttcta 397
Query: 241 tacctttccaaagacaaacaaatacttcagcaaatatacacccttgtcataatgtttata 300
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 396 tacctttccaaagacaaacaaatacttcagcaaatatacactattgtcataatgtttata 337
Query: 301 tattttctctcttgttcatatttattatattctgtaaagttaatattctcaagctattta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tattttctctcttgttcatatttattatattctgtaaagttaatattctcaagctattta 277
Query: 361 ttgcttgcccccccataatactgaaagtaaatagaagcaaatatacttgagtc-agtgat 419
|||||||| | | ||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 276 ttgcttgctgctctataatactgaaagtaaatagaagcaaatatacttgagtcga-tgat 218
Query: 420 ttactaattaatttag 435
||||||||||||||||
Sbjct: 217 ttactaattaatttag 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 837
Length adjustment: 9
Effective length of query: 427
Effective length of database: 828
Effective search space: 353556
Effective search space used: 353556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_g20.g1 MSMg01no151_g20.g1 CHROMAT_FILE:
MSMg01no151_g20.g1 PHD_FILE: MSMg01no151_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:14 2005
(280 letters)
>mm_chr14_21946561_21947240
Length = 680
Score = 495 bits (256), Expect = e-144
Identities = 274/280 (97%), Gaps = 2/280 (0%)
Strand = Plus / Plus
Query: 1 attccgagagttcatggccaagtgaactggcccacactgcaagctttcctgttcagcgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attccgagagttcatggccaagtgaactggcccacactgcaagctttcctgttcagcgag 260
Query: 61 agactgtctcc-ggtcaataggacaaaatgtagaggaaaaaccctcattttctgtcctgg 119
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agactgtctcaagg-caataggacaaaatgtagaggaaaaaccctcattttctgtcctgg 319
Query: 120 atgaacacactttgctctggtctccacatgttccatcaaggtgcatacagcagacaccac 179
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctgaacacactttactctggtctccacatgttccatcaaggtgcatacagcagacaccac 379
Query: 180 atgattctgtttgcttacttgtttacctgcctcagacctaaagccagcacctcagttgtg 239
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 380 atgattctgtttgcttacttgtttacctgcctcacacctaaagccagcacctcagttgtg 439
Query: 240 aggaaccactgataccgtcttcctacagtcagtaataaag 279
||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aggaaccactgataccgtcttcctacagtcagtaataaag 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
