Query= MSMg01no152_n07.b1 MSMg01no152_n07.b1 CHROMAT_FILE:
MSMg01no152_n07.b1 PHD_FILE: MSMg01no152_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:02 2005
(498 letters)
>mm_chr14_97809385_97810282
Length = 898
Score = 890 bits (460), Expect = 0.0
Identities = 481/488 (98%), Gaps = 1/488 (0%)
Strand = Plus / Minus
Query: 10 tgcccttcatctgttttttaaagattattttcctttttatttattcttctctcatacttt 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 tgcccttcatctgttttttaaagattattttcctttttatttattcttctctcatacttt 839
Query: 70 acatccttactgcgttttctgctcttcccaacctctacccttgactctctattctcatag 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 acatccttactgcgttttctgctcttcccaacctctacccttgactctctattctcatag 779
Query: 130 atccattccccttcacctcccctttaaaaagatcaggccttctagttagtgatagcaatc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 atccattccccttcacctcccctttaaaaagatcaggccttctagttagtgatagcaatc 719
Query: 190 aaacttggcataacaagtaacaacaccgggcacatattcttacgtcaaggctggacaagt 249
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 aaacttggcataacaagtaacaacaccgggcacatattcttacgtcaaggctggacaagg 659
Query: 250 ccaatatagtgaaaagggtcattttctttcatcaaaagtttcttggatattgtaaggaaa 309
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ccaatagagtgaaaagggtcattttctttcatcaaaagtttcttggatattgtaaggaaa 599
Query: 310 aggatgttgaatgctttcagaaaataagatttcttaactttgctaggcattcttactatt 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 aggatgttgaatgctttcagaaaataagatttcttaactttgctaggcattcttactatt 539
Query: 370 gctcttcgtgtcttctttgcatcaaatcttatgtatatatgataaaagtttttgccacaa 429
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 538 gctcttcgtgtcttctttgtatcaaatcttatgtatatatgagaaaagtttttgccacaa 479
Query: 430 cactattttattgactgattgattgattgattgatttttgtttttctgacacagactttc 489
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 478 cactattttattgactgattgattgattgattgatttt-gtttttctgagacagagtttc 420
Query: 490 tctgtgta 497
||||||||
Sbjct: 419 tctgtgta 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no152_n07.g1 MSMg01no152_n07.g1 CHROMAT_FILE:
MSMg01no152_n07.g1 PHD_FILE: MSMg01no152_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:03 2005
(321 letters)
>mm_chr14_97687177_97687897
Length = 721
Score = 598 bits (309), Expect = e-175
Identities = 318/321 (99%)
Strand = Plus / Plus
Query: 1 cataacatttttaggttgttttctttgcagaaaggattgatgtgatctctctatcaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cataacatttttaggttgttttctttgcagaaaggattgatgtgatctctctatcaatat 260
Query: 61 aaagagatatgttcacaatataattgtccagtagtgtagaacttggtaacaatgcaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagagatatgttcacaatataattgtccagtagtgtagaacttggtaacaatgcaagca 320
Query: 121 tgatttatctttgtggacccaattctagatatttctgagtcccattgcattatgtgccat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatttatctttgtggacccaattctagatatttctgagtcccattgcattatgtgccaa 380
Query: 181 ggcatagttgaggggaaaaaaaagcttggtcaaatattggaacagaaaaatattaatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcatagttgaggggaaaaaaaagcttggtcaaatattggaacagaaaaatattaatttc 440
Query: 241 ttgaaatattatttggaaaagagcttcatcatgcatcccatcttacacagttaaaataga 300
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 441 ttgaaatattatttggaaaagagcttcatcatgcatcccatcttaaacagttaaaagaga 500
Query: 301 actaaccaagcttatactgat 321
|||||||||||||||||||||
Sbjct: 501 actaaccaagcttatactgat 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
