Query= MSMg01no154_f10.b1 MSMg01no154_f10.b1 CHROMAT_FILE:
MSMg01no154_f10.b1 PHD_FILE: MSMg01no154_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:57 2005
(113 letters)
>mm_chr14_17974132_17974644
Length = 513
Score = 182 bits (94), Expect = 6e-51
Identities = 106/110 (96%)
Strand = Plus / Plus
Query: 1 tggatggaaatcttgaaaataggtagactgactctgtataggacaatgctatgtgatgca 60
||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||
Sbjct: 201 tggatggaaatcttgaaaataggtagattgactctgtataagacaatgctatgtgaggca 260
Query: 61 taattcacacactatatgattcacatatttaactacaactcagtgactta 110
|||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 taattcacacactataggattcacatatttaactacaactcagtgactta 310
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 113
Length of database: 513
Length adjustment: 8
Effective length of query: 105
Effective length of database: 505
Effective search space: 53025
Effective search space used: 53025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no154_f10.g1 MSMg01no154_f10.g1 CHROMAT_FILE:
MSMg01no154_f10.g1 PHD_FILE: MSMg01no154_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:57 2005
(289 letters)
>mm_chr14_18128610_18129298
Length = 689
Score = 493 bits (255), Expect = e-144
Identities = 277/289 (95%), Gaps = 8/289 (2%)
Strand = Plus / Minus
Query: 1 cagaaggagagttttgaagaggaatttaggtcaccatggtgaaggcctcttcaccatcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cagaaggagagttttgaagaggaatttaggtcaccatggtgaaggcctcttcaccatcta 337
Query: 61 gtagaaaggacttgagtgacatgcacatcttcccaggaagtgatccaccacattaacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gtagaaaggacttgagtgacatgcacatcttcccaggaagtgatccaccacattaacaca 277
Query: 121 atcctgcagtgccaggtcatccaaaatccttgtcctatctcaagactgtcctgttttgct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 276 atcctgcagtgccaggtcatccaaaatccttgtcctatctcaagactgtcctgttttgtt 217
Query: 181 tttgtttttaaaaagattatttatttatttatttatttatttatttatttatttatttat 240
|||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 216 tttgtttttaaaaaga--------ttatttatttatttatttatttatttatttatttat 165
Query: 241 ttatttgtgttttgcatatgagtatactgttactgtttccagacacacc 289
||| ||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 164 ttagttgggttttgtatatgagtatactgttactgtttccagacacacc 116
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 9
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
