Query= MSMg01no154_l13.b1 MSMg01no154_l13.b1 CHROMAT_FILE:
MSMg01no154_l13.b1 PHD_FILE: MSMg01no154_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:26 2005
(573 letters)
>mm_chr14_19460861_19461833
Length = 973
Score = 1050 bits (543), Expect = 0.0
Identities = 561/567 (98%), Gaps = 1/567 (0%)
Strand = Plus / Plus
Query: 8 gaattctatttatc-gaatataaaggaggtctcgcctttctatcttgattgatcaggtgg 66
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctatttatatgaatataaaggaggtctcgcctttctatcttgattgatcaggtgg 266
Query: 67 actacccatcccattcccatacttagacatggcaaactccatctctatagttttattttt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 actacccatcccattcccatacttagacatggcaaactccatctctatagttttattttt 326
Query: 127 attgtatgcatgtgggtattttgcctggatgcatgtctgtgcaccacatgcaggcagtac 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 attgtatgcatgtgggtattttgcctggatgcatgtctgtgcaccacatgcaggcagtac 386
Query: 187 catggagcacaaaagaacatgctgtatgctcaggaactggagttgtagacaattgttagt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 catggagcacaaaagaacatgctgtatgctcaggaactggagttgtagacaattgttagt 446
Query: 247 tccatgtgggtactggaaattgagcctgtttcttctggaagagcagtctcttagcttctg 306
|||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 447 tccatgtgggtactggaaattgagcctgggtcttttggaagagcagtctcttagcttctg 506
Query: 307 agtcatcttttcagcatcctccatcttacaatttttgaatatccttccatggtctcaagt 366
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agtcatctttttagcatcctccatcttacaatttttgaatatccttccatggtctcaagt 566
Query: 367 cctcttcaaacgaaattcttttacccaatgtagtacttctcactttcagctttaccagat 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cctcttcaaacgaaattcttttacccaatgtagtacttctcactttcagctttaccagat 626
Query: 427 ctaaaacccactgacattcaggtcgtgggtgcacacctgagatacctactccactaggtc 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ctaaaacccactgacattcaggtcgtgggtgcacacctgagatacctactccactaggtc 686
Query: 487 accccaggctcctcctgagagacagatgcatggctacatcttctttctctttcactctgc 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 accccaggctcctcctgagagacagatgcatggctacatcttctttctctttcactctgc 746
Query: 547 accccaacttgcagaggctgcaagaga 573
|||||||||||||||||||||||||||
Sbjct: 747 accccaacttgcagaggctgcaagaga 773
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_l13.g1 MSMg01no154_l13.g1 CHROMAT_FILE:
MSMg01no154_l13.g1 PHD_FILE: MSMg01no154_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:26 2005
(564 letters)
>mm_chr14_19594421_19595384
Length = 964
Score = 760 bits (393), Expect = 0.0
Identities = 405/409 (99%)
Strand = Plus / Minus
Query: 1 tgggtggcaatgagacagcaggggaggtaaatgatgcagtctggtgactgcccataggtc 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 409 tgggtggcaatgagacagcaggggaggtaaatgatgcagtctagtgactgcccataggtc 350
Query: 61 ctattctgggatgctaagcagcttatccaaatgtcagtccagtgtgtttgcattgcatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ctattctgggatgctaagcagcttatccaaatgtcagtccagtgtgtttgcattgcatct 290
Query: 121 ctcagaacattcatctgtttacatcaaaaaccttgggtgcctcatgtctctgctgacagc 180
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 289 ctcagaacattcgtctgtttacatcaaaaaccttgggtgccttgtgtctctgctgacagc 230
Query: 181 ctttcaggctcagcaccctagttggtgactgtcttagttagggttttactgctgtgaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ctttcaggctcagcaccctagttggtgactgtcttagttagggttttactgctgtgaaca 170
Query: 241 gacaccatgaccaaggcaagtcttataaaaaacaacatttaattggggctggcttacagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gacaccatgaccaaggcaagtcttataaaaaacaacatttaattggggctggcttacagg 110
Query: 301 ttcagaggttcagtccattatcatcaaggtgggagcatggcagtatccaggcaggcatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ttcagaggttcagtccattatcatcaaggtgggagcatggcagtatccaggcaggcatgg 50
Query: 361 tgcaggaggagctgagagttctatgtcttcatccaaaggctgctagtgg 409
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 tgcaggaggagctgagagttctatgtcttcatccaaaggctgctagtgg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
