Query= MSMg01no155_k09.b1 MSMg01no155_k09.b1 CHROMAT_FILE:
MSMg01no155_k09.b1 PHD_FILE: MSMg01no155_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:35 2005
(473 letters)
>mm_chr14_48775473_48776347
Length = 875
Score = 835 bits (432), Expect = 0.0
Identities = 462/474 (97%), Gaps = 6/474 (1%)
Strand = Plus / Minus
Query: 4 ggaattctcaaag---aaaccataataattttaactaatgaaaaaatctcatggatgaaa 60
||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ggaattctcaaagaataaa--ataataattttaactaatgaaaaaatctcatggatgaaa 618
Query: 61 taagaaacaatgccaccccaccggagcccccccccaagtcccctcaatcctcccacaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 taagaaacaatgccaccccaccggagcccccccccaagtcccctcaatcctcccacaggt 558
Query: 121 tggtaaatgactgttgtttaaagctagcaggtacagagtagcacgtggtaacaattagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tggtaaatgactgttgtttaaagctagcaggtacagagtagcacgtggtaacaattagct 498
Query: 181 gactgctgcatctcaaaggcaagttaactaagtagcttctttagttgttaaagatttgaa 240
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 497 gactgctgcatctcaaaggcaagttaactaagtagcttctttagtaattaaagatttgaa 438
Query: 241 gccaaacatacattatcttttaaaacttttatacattaaaaaaaaa-ctcattcagaagg 299
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 437 gccaaacatacattatctttttaaacttttatacattaaaaaaaaaactcattcagaagg 378
Query: 300 gtaagcataaattagagataattttaaatttaatccctttaaatctagtaagaaaaagaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gtaagcataaattagagataattttaaatttaatccctttaaatctagtaagaaaaagaa 318
Query: 360 atttcaaaatgtgcaccataagagtatgattgatatatttgatttctttcccctaatcat 419
||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 317 atttcaaaatgtgtaccataagagtatggttgatatatttgatttctttccccaaatcat 258
Query: 420 ttccattaaaatctatggtctcctaaacctattaatatatgataatttaatctc 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ttccattaaaatctatggtctcctaaacctattaatatatgataatttaatctc 204
Score = 211 bits (109), Expect = 9e-59
Identities = 115/117 (98%)
Strand = Plus / Minus
Query: 45 aatctcatggatgaaataagaaacaatgccaccccaccggagcccccccccaagtcccct 104
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 209 aatctcatggatgaaataagaaacaatgccaccccaccagagcccccccccaagtcccct 150
Query: 105 caatcctcccacaggttggtaaatgactgttgtttaaagctagcaggtacagagtag 161
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 149 caatcctcccacaggttggtaaatgactgttgtttaaagctagcagatacagagtag 93
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 473
Length of database: 875
Length adjustment: 10
Effective length of query: 463
Effective length of database: 865
Effective search space: 400495
Effective search space used: 400495
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_k09.g1 MSMg01no155_k09.g1 CHROMAT_FILE:
MSMg01no155_k09.g1 PHD_FILE: MSMg01no155_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:35 2005
(264 letters)
>mm_chr14_48623679_48624342
Length = 664
Score = 464 bits (240), Expect = e-135
Identities = 255/264 (96%), Gaps = 8/264 (3%)
Strand = Plus / Plus
Query: 1 acatttcagactcacctaccttcttggagcctagtctttggctgggtcttctaagtgggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatttcagactcacctaccttcttggagcctagtctttggctgggtcttctaagtgggt 260
Query: 61 ccagttagatttcaaaggtactggctcttctgtttgcagcagacctctctgagggatggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagttagatttcaaaggtactggctcttctgtttgcagcagacctctctgagggatggg 320
Query: 121 gctgttgacccttgatagtcctaggtttcctctctctctagttctttctttctttctttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgttgacccttgatagtcctaggtttcctctctctctagttctttctttctttctttc 380
Query: 181 tttctttctttctttctttctttctttctttctttctttctttctttcttccttccttcc 240
|||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 381 tttctttctttctttctttctttctttctttctttctt-c-------cttccttccttcc 432
Query: 241 ttccttccttccttcctttctttc 264
|||||||||||||| |||||||||
Sbjct: 433 ttccttccttcctttctttctttc 456
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 29
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 664
Length adjustment: 9
Effective length of query: 255
Effective length of database: 655
Effective search space: 167025
Effective search space used: 167025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
