Query= MSMg01no156_l12.b1 MSMg01no156_l12.b1 CHROMAT_FILE:
MSMg01no156_l12.b1 PHD_FILE: MSMg01no156_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:55 2005
(313 letters)
>mm_chr14_121254707_121255419
Length = 713
Score = 565 bits (292), Expect = e-165
Identities = 304/308 (98%)
Strand = Plus / Minus
Query: 6 aattcttaccgggtaatagggcagaatagttgaggtgagggatccacagctttcccagcc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aattcttaccgggtaatagggcagaatagttgaggtgagggatccacagctttcccagcc 454
Query: 66 caggtcctggttctcattagactgtctttgcacgtgcgcgcatgcgcacgtgcgtatgct 125
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 453 caggtcccggttctcattagactgtctttgcacgtgcgcgcatgcgcacatgcgtatgct 394
Query: 126 gcgttccagattgatgtccccagactgtccttggcttatctgtgtcttctcagtagaatg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gcgttccagattgatgtccccagactgtccttggcttatctgtgtcttctcagtagaatg 334
Query: 186 gtgcaaagttcagggtggggcaggccaggggtgaccttggaagcccagaactgatccgaa 245
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 333 gtgcaaagttcagggtggggcaggacaggggtgaccttggaagcccagaactgatccgaa 274
Query: 246 agagcccagaggccaagcctttcttgagggtaggctgaagacccaggaccaaatcattat 305
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 273 agagcccagaggccaagcctttcttgaggggaggctgaagacccaggaccaaatcattat 214
Query: 306 ttccgttt 313
||||||||
Sbjct: 213 ttccgttt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_l12.g1 MSMg01no156_l12.g1 CHROMAT_FILE:
MSMg01no156_l12.g1 PHD_FILE: MSMg01no156_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:55 2005
(245 letters)
>mm_chr15_80040754_80041398
Length = 645
Score = 410 bits (212), Expect = e-119
Identities = 239/248 (96%), Gaps = 4/248 (1%)
Strand = Plus / Plus
Query: 1 taggccagcctggtctacaaagtgagttccaggacagccagggctacacagagaaaccct 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 199 taggccagcctggtctacaaagtgagttccagaacagccagggctacacagagaaaccct 258
Query: 61 gtctc-aaaaaacaa-aagc-aaaaaagagaaagagaaggaaaattataaaaggaacagt 117
||||| ||||||||| || | |||||||||||||||||||||||||| ||||||||||||
Sbjct: 259 gtctcgaaaaaacaacaa-caaaaaaagagaaagagaaggaaaattagaaaaggaacagt 317
Query: 118 agcccaggacagggcatctgcaagcccctgggcatttggcagctgctccacaccccaccc 177
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 318 agcccaggacagggcatctgcaagcccccgggcacttggcagctgctccacaccccaccc 377
Query: 178 tctacccactggagcctgacacccctctaggacagtttccccctggctacattttgctct 237
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 378 tctacccactggagcctgacacccctctaggacagtttccctctggctacattttgctct 437
Query: 238 aggaacca 245
||||||||
Sbjct: 438 aggaacca 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
