Query= MSMg01no157_h15.b1 MSMg01no157_h15.b1 CHROMAT_FILE:
MSMg01no157_h15.b1 PHD_FILE: MSMg01no157_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:49 2005
(663 letters)
>mm_chr14_20953060_20954122
Length = 1063
Score = 1210 bits (626), Expect = 0.0
Identities = 653/666 (98%), Gaps = 7/666 (1%)
Strand = Plus / Minus
Query: 5 gaattcagga-------ccccccccccccccgcctgccccaagagctcttaactgtcaag 57
|||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 gaattcaggactcccccccccccccccccccgcctgccccaagagctcttaactgtcaag 821
Query: 58 ccatcttcccagcctggagctgtacttctgatccagtcatgctgggtgaagccagagctc 117
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 820 ccatcttcccagcctggagttgtacttttgatccagtcatgctgggtgaagccagagctc 761
Query: 118 catcctgctagggcacttgtgtgaagccatagtcagacactgcccccaggcaggtttctc 177
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 760 catcctgctagggcacttgtgtgaagccatagtcagacattgcccacaggcaggtttctc 701
Query: 178 tgaaggacagtgcctatttccagtgcttgagaagggccccagggaaactgtcccttacct 237
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tgaaggacagtgcctacttccagtgcttgagaagggccccagggaaactgtcccttacct 641
Query: 238 tcctcacacacgatgggtggaacaccctgtaccggccagatgcctcagataagcatcgcc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tcctcacacacgatgggtggaacaccctgtaccggccagatgcctcagataagcatcgcc 581
Query: 298 ccccctgctgacttgttagcaatgagaactggctacgtccatcaacaaaagaagccccct 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ccccctgctgacttgttagcaatgagaactggctacgtccatcaacaaaagaagccccct 521
Query: 358 taaatgtggctaatttttatgtgtttgcttgtttcgcagttctggggagaggaggtctaa 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 taaatgtggctaatttttatgtgtttgcttgtttcgcagttctggggagaggaggtctaa 461
Query: 418 aactgaacagcccacctagctattttggtctataaacagagaggtgatttctgttccttt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aactgaacagcccacctagctattttggtctataaacagagaggtgatttctgttccttt 401
Query: 478 ggacatataataggaagacctgatgcttctgtgctctgggggaagatcgcaatctaagaa 537
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 400 ggacatataataggaagacctgatgcttctgtcctctgggggaagatcgcaatctaagaa 341
Query: 538 atccaagtaccttgagacccaagcaataaagaagcccaactccaatcatgtgaccacatg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 atccaagtaccttgagacccaagcaataaagaagcccaactccaatcatgtgaccacatg 281
Query: 598 gacaaattagacaacatcttaaacaccccagccctaggcaacatttcaaagtacatagcc 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gacaaattagacaacatcttaaacaccccagccctaggcaacatttcaaagtacatagcc 221
Query: 658 agccat 663
||||||
Sbjct: 220 agccat 215
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_h15.g1 MSMg01no157_h15.g1 CHROMAT_FILE:
MSMg01no157_h15.g1 PHD_FILE: MSMg01no157_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:49 2005
(290 letters)
>mm_chr14_20850413_20851104
Length = 692
Score = 545 bits (282), Expect = e-160
Identities = 286/288 (99%), Gaps = 2/288 (0%)
Strand = Plus / Plus
Query: 1 agcttggctccacggtctccgtcacatatgaccccactctgcccctactcttgggatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcttggctccacggtctccgtcacatatgaccccactctgcccctactcttgggatatc 260
Query: 61 agatccttcccttgcattttaaattacattaagaagaggtttaatttaatcattagacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatccttcccttgcattttaaattacattaagaagaggtttaatttaatcattagacat 320
Query: 121 tatcctgacttcctattagcaattttgtcttgaaatgcaattaagcataaaacattataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatcctgacttcctattagcaattttgtcttgaaatgcaattaagcataaaacattataa 380
Query: 181 tgttagcaag--tcatgtttatataactgcttaaatcttaagagaaaaatattcagaact 238
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttagcaagagtcatgtttatataactgcttaaatcttaagagaaaaatattcagaact 440
Query: 239 ttacttcacatgatatgccaaaataaattcaagaagattaaaacatta 286
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttacttcacatgatatgccaaaataaattcaagaagattaaaacatta 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 692
Length adjustment: 9
Effective length of query: 281
Effective length of database: 683
Effective search space: 191923
Effective search space used: 191923
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
