MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-157I09
Chromosome	14 (Build37)
Map Location	119,783,990 - 119,784,206
singlet/doublet	singlet
Overlap gene	Hs6st3
Upstream gene	Abcc4, Cldn10, Dzip1, Dnajc3a, LOC100043828, Ugcgl2, LOC619601
Downstream gene	EG621324, LOC100043830, Oxgr1, Gabarapl2-ps, LOC100043831, Mbnl2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Abcc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239273 MGI:2443111
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cldn10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58187 MGI:1913101
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Dzip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66573 MGI:1914311
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnajc3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100037258 MGI:107373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043828 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043828
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Ugcgl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66435 MGI:1913685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hs6st3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50787 MGI:1354960
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC619601 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619601
definition	note : tera pseudogene pseudo : _no_value

name	EG621324 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621324 MGI:3643635
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 83 ESTs pseudo : _no_value

name	LOC100043830 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043830
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Oxgr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239283 MGI:2685145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gabarapl2-ps (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606515
definition	note : GABA(A) receptor-associated protein-like 2 pseudogene pseudo : _no_value

name	LOC100043831 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Mbnl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105559 MGI:2145597
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Abcc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142358785 GeneID:239273 MGI:2443111
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family C (CFTR/MRP), member 4 transcript_id : NM_001033336.2

name	Cldn10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357583 GeneID:58187 MGI:1913101
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 10 transcript_id : NM_023878.2

name	Cldn10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144226219 GeneID:58187 MGI:1913101
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 10 transcript_id : NM_021386.3

name	Dzip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:57242787 GeneID:66573 MGI:1914311
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DAZ interacting protein 1 transcript_id : NM_025943.2

name	Dnajc3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542562 GeneID:100037258 MGI:107373
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily C, member 3A transcript_id : NM_008929.2

name	Ugcgl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486936 GeneID:66435 MGI:1913685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-glucose ceramide glucosyltransferase-like 2 transcript_id : NM_001081252.1

name	Hs6st3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802434 GeneID:50787 MGI:1354960
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heparan sulfate 6-O-sulfotransferase 3 transcript_id : NM_015820.2

name	LOC100043830 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265872 GeneID:100043830
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043830 transcript_id : XM_001481042.1

name	Oxgr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84662762 GeneID:239283 MGI:2685145
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oxoglutarate (alpha-ketoglutarate) receptor 1 transcript_id : NM_001001490.2

name	LOC100043831 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265874 GeneID:100043831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043831 transcript_id : XM_001481043.1

name	Mbnl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:140971799 GeneID:105559 MGI:2145597
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : muscleblind-like 2 transcript_id : NM_175341.4

name	Mbnl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:140970688 GeneID:105559 MGI:2145597
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : muscleblind-like 2 transcript_id : NM_207515.2

name	Abcc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83716009 CCDS:CCDS27335.1 GeneID:239273 MGI:2443111
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS]; GO:0005886 - plasma membrane [Evidence ISS]; GO:0031088 - platelet dense granule membrane [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0005254 - chloride channel activity [Evidence IEA]; GO:0015559 - multidrug efflux pump activity [Evidence TAS]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006855 - multidrug transport [Evidence TAS] codon_start : 1 exception : mismatches in translation product : ATP-binding cassette, sub-family C (CFTR/MRP), member 4 protein_id : NP_001028508.1

name	Cldn10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21617849 CCDS:CCDS27336.1 GeneID:58187 MGI:1913101
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] GO_function : GO:0042802 - identical protein binding [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence ISS] codon_start : 1 exception : mismatches in translation note : isoform a is encoded by transcript variant 1; claudin-10 product : claudin 10 isoform a protein_id : NP_076367.1

name	Cldn10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946728 CCDS:CCDS27337.1 GeneID:58187 MGI:1913101
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] GO_function : GO:0042802 - identical protein binding [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence ISS] codon_start : 1 exception : mismatches in translation note : isoform b is encoded by transcript variant 2; claudin-10 product : claudin 10 isoform b protein_id : NP_067361.1

name	Dzip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:57242788 GeneID:66573 MGI:1914311
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] [Evidence ISS]; GO:0043234 - protein complex [Evidence ISS] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007281 - germ cell development [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : DAZ interacting protein 1 protein_id : NP_080219.2

name	Dnajc3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542563 CCDS:CCDS27338.1 GeneID:100037258 MGI:107373
definition	codon_start : 1 note : protein kinase, interferon inducible double stranded RNA dependent inhibitor; DnaJ (Hsp40) homolog, subfamily C, member 3 product : DnaJ (Hsp40) homolog, subfamily C, member 3B protein_id : NP_032955.2

name	Ugcgl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486937 GeneID:66435 MGI:1913685
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003910 - DNA ligase (ATP) activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0003980 - UDP-glucose:glycoprotein glucosyltransferase activity [Evidence IEA] GO_process : GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006486 - protein amino acid glycosylation [Evidence IEA] codon_start : 1 product : UDP-glucose:glycoprotein glucosyltransferase 2 protein_id : NP_001074721.1

name	Hs6st3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7657192 CCDS:CCDS27339.1 GeneID:50787 MGI:1354960
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : heparan sulfate 6-O-sulfotransferase 3 protein_id : NP_056635.1

name	LOC100043830 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265873 GeneID:100043830
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481092.1

name	Oxgr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47894384 CCDS:CCDS27340.1 GeneID:239283 MGI:2685145
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0001609 - adenosine receptor activity, G-protein coupled [Evidence ISS]; GO:0016208 - AMP binding [Evidence ISS]; GO:0016494 - C-X-C chemokine receptor activity [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0001883 - purine nucleoside binding [Evidence ISS]; GO:0045028 - purinergic nucleotide receptor activity, G-protein coupled [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007188 - G-protein signaling, coupled to cAMP nucleotide second messenger [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : G protein-coupled receptor 80 product : G protein-coupled receptor 99 protein_id : NP_001001490.1

name	LOC100043831 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265875 GeneID:100043831
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481093.1

name	Mbnl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425032 GeneID:105559 MGI:2145597
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : muscleblind-like 2 isoform 1 protein_id : NP_780550.1

name	Mbnl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46411185 GeneID:105559 MGI:2145597
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : muscleblind-like 2 isoform 2 protein_id : NP_997398.1

name	LOC100043828 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043828
definition	number : 1 pseudo : _no_value

name	EG621324 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621324
definition	number : 1 pseudo : _no_value

name	EG621324 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621324
definition	number : 2 pseudo : _no_value

clone name	MSMg01-468C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184C12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542F15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-398C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337G23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-157I09.T7 (MSMg01no157_i09.b1)	MSMg01-157I09.TJ (MSMg01no157_i09.g1)
ACC	AG357983	AG357984
length	722	719
length of high quality (start - end)	652 (37 - 688)	216 (392 - 607)
definition	CHROMAT_FILE: MSMg01no157_i09.b1 PHD_FILE: MSMg01no157_i09.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:22:53 2005	CHROMAT_FILE: MSMg01no157_i09.g1 PHD_FILE: MSMg01no157_i09.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:22:53 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTA TTTAGCTCTGTAACCCATTTTTAAATAGGGTTATTTGTTCTCTAGAGTCT AGCTTCTTGAGTTCTTTGTATATATTGGATTAGCCCTCTATAAGAAGTAG GGGTGCTAAAGATATTTTCCCAATCTGTTGGTTGCCATTTTGTTCTATTG GCAGTGTCCTTTGCCTTATAGAAACTTTGTAATTTTAGGAGTCCCATTTG TCAATTCTTGATCTTAGAGCATAAGGTGTTCTGTTAGTGAAAATTTTACC TATGCCCATGTGTTTGAGGTTCTTCCCCACTTTCTTTTCTATTAGTTTCA GTGTCTCTGGTTTTATGCGGAGGTCCTTGATCCACTTGGACTTGACCTTT GTACAAGGAGATAAGAATGGATCAATTTGCATTCTTCTGCATGCTAACTG CCAGTTGAACCAGCACTATTTGTTGAAAATGCTGTCTTTTTTCAACTGGA TGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTT ATTTCTGGGTTTTCAATCCTATTCAATTGATCTACCTGCCTGTCACTGTA CTAATATCATGCAGGTTTTTATCACTATTGCTATGTAGTACAGCTTGAGG TCTGGGATGATGATTCTGATCGAGGTTCTTTTTGTTGTTGTTGGTGAGAA TAGNTTACACTATTCTGGGTTT	TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXATTCCTCTTCTGCGGGGGTGAGGGGCACCTGTGG CCCTGAGCTGTCCCCTATTACAAAGTAGCTGGGGTCTTTTTTAGTTCCTT CTTTTGAGGTGTCTTTCACGCTGGATGTTTCCACGTAGTGAAGGTCATTG CTTGTGGAGAGTGTTGGTCTCCTGGAGCGCCATCACTGTGACGAGCTGCT GATTAGGGTATTCTATGAAGGTCTGCTTTGCTCATAGCTAGATGGGAAAT GTTATTACATGATCTTTCTGCTCTCTCCTACTACTGGCTTGCCCACATAT AATTAATAAGAGGGCTTTTCTCCCCTGTTGTCTGAGAATCAAACTTGAAC AAAAGTAACAGAGCGCGATCATATTTTCCAGTAAAGTTATTTTCAGGGTT CATATTGAAAAAAAACATTTGGGTTTGTAGGGATCTCTCCCACAGCACAG ATTAAATCATCTCTGGTGACACACATTGGGACAAGGCGTTTTGGGAACAT TTCGCTCTTTGCTTTGTTTTATAGATTTATTTGCATTAGGTTAGGCAGGC AGCATGCAGGAGGAATCCTCCTTAAAGTGTGCTCACTGCAGCCTGTTTTC ATAGGGCACTCATTAATTCTTGAGAAATGCAATTACTTAGAAAACAAAAT ATGGCCTCTAGCAATTTAC
quality values	Open. Hide. 11 11 21 21 25 24 16 19 10 10 10 19 19 41 44 59 35 35 36 36 36 36 39 53 53 57 57 57 57 57 57 33 32 22 28 28 40 41 68 68 47 47 47 47 50 50 68 68 68 68 68 50 50 50 50 43 50 57 59 59 68 68 68 51 50 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 53 53 43 43 36 37 37 37 39 43 32 34 25 18 15 19 19 19 14 9 9 9 10 16 28 34 41 59 59 50 53 53 53 53 53 57 57 57 57 59 59 59 59 59 57 53 53 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 68 59 59 57 57 68 68 68 57 57 57 57 57 57 59 59 57 57 57 57 57 57 59 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 59 68 59 59 57 57 57 59 57 57 54 57 57 57 57 57 54 57 57 57 57 57 59 68 68 59 59 57 57 57 59 59 68 59 59 59 59 59 57 57 57 57 57 57 57 59 48 48 48 43 43 39 39 43 43 43 48 57 57 48 48 48 50 50 42 47 39 39 39 39 37 36 34 37 37 37 37 37 37 37 37 37 47 59 59 46 46 46 59 47 37 32 35 35 37 37 47 59 34 27 16 16 16 21 21 28 34 15 9 9 9 9 18 20 37 37 30 20 18 3 0 3 23 18 28 28 34 34 40 39 39 35 31 26 31 29 32 32 29	Open. Hide. 9 9 9 9 9 9 10 25 23 26 14 28 28 37 37 30 34 28 37 24 25 12 34 21 30 24 28 20 12 12 18 18 30 28 42 29 40 25 28 24 33 31 26 25 31 30 32 24 28 24 34 24 37 37 42 42 37 41 41 20 16 16 28 24 37 24 23 22 29 41 35 35 42 42 39 32 32 21 32 32 14 14 14 18 14 18 30 34 44 43 35 35 27 27 24 28 14 21 18 43 38 30 26 24 24 13 13 12 21 18 28 28 38 38 41 38 38 42 33 32 43 44 43 43 21 21 13 12 11 15 16 15 15 18 20 20 43 44 59 59 32 32 17 38 22 39 34 43 42 45 45 43 57 45 43 42 34 38 14 14 14 18 18 38 35 43 31 39 39 39 35 35 19 24 19 24 24 43 39 39 39 39 35 39 18 18 13 12 12 15 33 43 43 26 26 18 27 22 39 31 41 18 28 14 18 15 18 18 15 15 14 14 14 24 28 20 23 23 20 28 28 24 24 13 15 15 32 32 39 43 33 33 33 28 28 14 21 14 21 21 32 20 20 20 38 28 33 33 33 29 33 32 32 32 18 38 38 20 18 18 32 32 35 35 35 38 35 31 38 38 18 18 13 19 18 33 33 33 33 27 33 32 37 28 28 20 27 20 33 24 28 20 19 19 15 15 15 26 15 18 18 27 27 30 30 28 27 27 14 14 23 23 28 35 39 30 41 20 20 20 28 28 37 35 35 35 35 35 35 35 32 28 24 15 15 12 19 19 11 18 18 28 34 39 39 30 30 30 39 30 32 23 18 18 14 13 12 21 15 12 11 12 11 11 12 12 15 12 12 11 12 12 33 30 18 18 13 16 16 13 15 12 15 15 11 12 12 26 26 28 20 20 20 32 28 25 25 30 30 46 59 59 43 43 39 43 43 30 30 14 14 18 27 27 30 30 30 32 36 37 35 35 37 42 59 41 32 30 28 28 30 32 34 22 22 28 33 30 35 42 59 42 37 30 36 36 37 41 28 27 27 28 30 30 41 32 37 39 59 59 68 59 47 42 33 30 28 28 28 23 21 28 28 28 23 23 18 22 22 18 18 18 28 28 30 30 30 32 28 34 34 40 35 35 30 30 21 28 14 14 14 24 24 30 33 31 31 31 32 31 29 29 23 16 17 12 12 13 26 21 30 30 31 28 28 20 24 18 18 18 23 32 32 34 34 28 28 28 34 34 30 23 18 15 15 20 24 24 30 32 33 41 28 41 27 27 28 44 28 28 23 37 37 25 25 23 44 44 30 30 19 24 17 17 17 34 28 39 35 47 33 33 28 37 37 20 24 20 32 32 32 32 32 40 37 43 43 43 43 43 37 28 19 13 15 14 24 28 20 20 24 28 22 19 16 18 18 21 28 25 29 33 33 24 18 25 11 11 11 11 11 20 20 23 23 14 15 12 24 24 23 23 15 15 14 20 27 24 20 19 17 17 22 30 24 24 20 20 24 28 25 25 23 28 22 22 28 30 30 30 21 24 15 15 14 19 12 14 14 23 23 28 23 31 24 32 16 17 9 9 9 21 18 24 22 22 30 26 21 16 16 19 15 18 18 18 20 16 26 19 28 27 20 18 18 18 18 23 18

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no157_i09.g1 MSMg01no157_i09.g1 CHROMAT_FILE:
MSMg01no157_i09.g1 PHD_FILE: MSMg01no157_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:53 2005
         (216 letters)



>mm_chr14_119783789_119784406
          Length = 618

 Score =  393 bits (203), Expect = e-114
 Identities = 213/217 (98%), Gaps = 2/217 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   acttgaacaaaagtaacagagcgcgatcatattttccagtaaagttattttcagggttca 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 acttgaacaaaagtaacagagcgcgatcatattttccagtaaagttattttcagggttca 261

                                                                       
Query: 62  tattg--aaaaaaaacatttgggtttgtagggatctctcccacagcacagattaaatcat 119
           |||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 262 tattgaaaaaaaaaacatttgggtttgtagtgatctctcccacagcacagattaaatcat 321

                                                                       
Query: 120 ctctggtgacacacattgggacaaggcgttttgggaacatttcgctctttgctttgtttt 179
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 322 ctctggtgacacacattgggacaaggggttttgggaacatttcgctctttgctttgtttt 381

                                                
Query: 180 atagatttatttgcattaggttaggcaggcagcatgc 216
           |||||||||||||||||||||||||||||||||||||
Sbjct: 382 atagatttatttgcattaggttaggcaggcagcatgc 418


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 216
Length of database: 618
Length adjustment: 9
Effective length of query: 207
Effective length of database: 609
Effective search space:   126063
Effective search space used:   126063
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information