Query= MSMg01no160_a09.b1 MSMg01no160_a09.b1 CHROMAT_FILE:
MSMg01no160_a09.b1 PHD_FILE: MSMg01no160_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:52 2005
(272 letters)
>mm_chr14_121604897_121605568
Length = 672
Score = 455 bits (235), Expect = e-132
Identities = 263/277 (94%), Gaps = 9/277 (3%)
Strand = Plus / Plus
Query: 4 ggaattcttccacaacttcatacccccatggtccgtttttaaaagaatttttttttgtta 63
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 204 ggaattcttccacagcttcatacccccatggtccgtttttaaaagaatggttttttgtta 263
Query: 64 aggtgtttgaattgcgctggagttaatgaaagaaagaagattccaagaaaaaaaaatggc 123
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 264 aggtgtttgaattgtgctggagttaatgaaagaaagaagattccaggaaaaaaaaatggc 323
Query: 124 aacccataagcttaatcatgcatcttcttgcatgctggtgtgagaagaggagcctagaac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aacccataagcttaatcatgcatcttcttgcatgctggtgtgagaagaggagcctagaac 383
Query: 184 caaggattagtctaagcagacccaggtccc--------agcctacctgggaaatgtccgt 235
|||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 384 caaggattagtctaagcagacccaggtccctgtctgccagcctacctgggaaatgtccgt 443
Query: 236 aatgtgtacagcatattggaaacagcagagaacagaa 272
| |||||||||||||||||||||||||||||||||||
Sbjct: 444 a-tgtgtacagcatattggaaacagcagagaacagaa 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 272
Length of database: 672
Length adjustment: 9
Effective length of query: 263
Effective length of database: 663
Effective search space: 174369
Effective search space used: 174369
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no160_a09.g1 MSMg01no160_a09.g1 CHROMAT_FILE:
MSMg01no160_a09.g1 PHD_FILE: MSMg01no160_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:52 2005
(280 letters)
>mm_chr14_121712847_121713526
Length = 680
Score = 507 bits (262), Expect = e-148
Identities = 274/278 (98%), Gaps = 1/278 (0%)
Strand = Plus / Minus
Query: 4 tcttaaggcaagcactaccaaaacaaagagaaatgagaacattccgttttgtggctgatc 63
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 649 tcttaaggcaagcactaccaaaacaaagagaaatgagaacattctgttttgtggctgatc 590
Query: 64 tccctaatacatacatacaagagaaaggactggggatgtagctcagcggtagagcagttg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tccctaatacatacatacaagagaaaggactggggatgtagctcagcggtagagcagttg 530
Query: 124 cgtggcatatgaggttctaggttcaatccacagtactacaaggaaaagaaaaa-gatggg 182
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 529 cgtggcatatgaggttctaggttcaatccacagtattacaaggaaaagaaaaaagatggg 470
Query: 183 acctccacagaaaagatgagtgaagcatataagtgaggcagttgcagaaagatgtaaata 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 acctccacagaaaagatgagtgaagcatataagtgaggcagttgcagaaagatgtaaata 410
Query: 243 atatgcgtgactgtgggaagtggatgaagccctaagta 280
||||||||||| ||||||||||||||||||||||||||
Sbjct: 409 atatgcgtgaccgtgggaagtggatgaagccctaagta 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
