Query= MSMg01no161_b07.b1 MSMg01no161_b07.b1 CHROMAT_FILE:
MSMg01no161_b07.b1 PHD_FILE: MSMg01no161_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:17 2005
(279 letters)
>mm_chr14_94023333_94024011
Length = 679
Score = 540 bits (279), Expect = e-158
Identities = 279/279 (100%)
Strand = Plus / Minus
Query: 1 tgcgtcatcgtgtgatgggaatgccaagaagagctaatggaatcttgggcatcgtttaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 tgcgtcatcgtgtgatgggaatgccaagaagagctaatggaatcttgggcatcgtttaga 584
Query: 61 gaagtgtgctttacaaaactattgagagtagttcccacagtcctctgcactaagaacagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gaagtgtgctttacaaaactattgagagtagttcccacagtcctctgcactaagaacagc 524
Query: 121 tgcaagataatgtcatgttttgaatgatgcatattatgagacactctaaaattagtgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tgcaagataatgtcatgttttgaatgatgcatattatgagacactctaaaattagtgaag 464
Query: 181 acaaatgaattattggaaatgatgctgtataaggaaaatgggggatttaagagttataga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 acaaatgaattattggaaatgatgctgtataaggaaaatgggggatttaagagttataga 404
Query: 241 tgcatgtcagtattttaaagttttcttctgcatgaaaaa 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tgcatgtcagtattttaaagttttcttctgcatgaaaaa 365
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no161_b07.g1 MSMg01no161_b07.g1 CHROMAT_FILE:
MSMg01no161_b07.g1 PHD_FILE: MSMg01no161_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:17 2005
(380 letters)
>mm_chr14_93869969_93870747
Length = 779
Score = 696 bits (360), Expect = 0.0
Identities = 375/380 (98%), Gaps = 1/380 (0%)
Strand = Plus / Plus
Query: 1 accagattacaaatcaagaaaatacaggatatacttgctaacatatgaaaattctacttc 60
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 accagattacaaatcaagaaaata-aggatatacttgctaacatatgaaaattctacttt 259
Query: 61 ctatggcatgtgaggatgataactttaaaacatttttcaaatgttatttaaaactatttt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttatggcatgtgaggatgataactttaaaacatttttcaaatgttatttaaaactatttt 319
Query: 121 tttaactcagtctggaatggaatataacacgacacaaattcagcttcctcccaggtaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttaactcagtctggaatggaatataacacgacacaaattcagcttcctcccaggtaaat 379
Query: 181 tgtatacagatttcactacttaataattgctctttctaatagctactctttcttttaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtatacagatttcactacttaataattgctctttctaatagctactctttcttttaatc 439
Query: 241 tatgagaatttattcttattaatcaaagtttcataaaaataaaggaatttataagagact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tatgagaatttattcttattaatcaaagtttcataaaaataaaggaatttataagagact 499
Query: 301 taaaaattagaaattcttatatttttggttctgttcctagcctttaacggctgagccata 360
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 500 taaaaattagaaattcttatatttttggttctgagcctagcctttaacggctgagccata 559
Query: 361 aaacacccatggaaggagtt 380
||||||||||||||||||||
Sbjct: 560 aaacacccatggaaggagtt 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 779
Length adjustment: 9
Effective length of query: 371
Effective length of database: 770
Effective search space: 285670
Effective search space used: 285670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
