Query= MSMg01no162_a16.b1 MSMg01no162_a16.b1 CHROMAT_FILE:
MSMg01no162_a16.b1 PHD_FILE: MSMg01no162_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:19 2005
(308 letters)
>mm_chr14_117768525_117769231
Length = 707
Score = 501 bits (259), Expect = e-146
Identities = 292/303 (96%), Gaps = 1/303 (0%)
Strand = Plus / Plus
Query: 5 gaattcatctttcctgtgagtcccgggaaaacttttcatgggcctacgttccaagaacct 64
|||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 205 gaattcgtctttcctgtgagtccc-ggaaaacttttcatgggtctacgttccaagaacct 263
Query: 65 ggctggagccttgcccatcagtgcaatggagtattttcaaaacttgagctgggctgacat 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 264 ggctggagccttgcccatcagtgcaatggagtattttcaaagcttgagctgggctgacat 323
Query: 125 gaatgggtggacggggctgggaatagaacaaccctgtctctccagaaatcgcaaatacct 184
|||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||
Sbjct: 324 gaatgggtggacggggctgggaatagcacagccccgtctctccagaaatcgcaaatacct 383
Query: 185 aacagtatcacgtgagtggcatcctctgcacgaacccacgacgcaccatccttcaattct 244
|||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||
Sbjct: 384 aacagtatcacgtgagtggcattctctgcacggacccacgacgcaccgtccttcaattct 443
Query: 245 gctccgtacatgcttgctgaagtaaacaaatatgcgagtctttgacagatacaccctctg 304
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 444 gctccgtacatgcttgctgaaggaaacaaatatgcgagtctttgacagatacaccctctg 503
Query: 305 ctg 307
|||
Sbjct: 504 ctg 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 707
Length adjustment: 9
Effective length of query: 299
Effective length of database: 698
Effective search space: 208702
Effective search space used: 208702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no162_a16.g1 MSMg01no162_a16.g1 CHROMAT_FILE:
MSMg01no162_a16.g1 PHD_FILE: MSMg01no162_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:19 2005
(280 letters)
>mm_chr14_117899019_117899698
Length = 680
Score = 509 bits (263), Expect = e-148
Identities = 275/279 (98%)
Strand = Plus / Minus
Query: 1 actcggggtctctgtgaagggaagggattcctaggagctgctgaccatcaattccgacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 479 actcggggtctctgtgaagggaagggattcctaggagctgctgaccatcaagtccgacct 420
Query: 61 cattggtatgctccatgccagtgcgactctttggtggcatctgaggagggacactcgagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 419 cattggtatgctccatgccagtgcgactctttggtggcatctgaggagggacacttgagg 360
Query: 121 ctatccttcggcctccatatgactggcactcatgtgcgcatccgtgcacaaaggaaaaca 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctatccttcggcctccatttgactggcactcatgtgcgcatccgtgcacaaaggaaaaca 300
Query: 181 catgcacacattcatatacaaagacaagttaagacatttcacattcatttgcacttgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 catgcacacattcatatacaaagacaagttaagacatttcacattcatttgcacttgttt 240
Query: 241 aaagtgcataattcttactagcaggctctacaaagagat 279
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 239 aaagtgcataattcttcctagcaggctctacaaagagat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
